RetrogeneDB ID: | retro_mputfur_440 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896909.1:21251854..21252846(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMPUG00000000720 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ACTB | ||
Ensembl ID: | ENSMPUG00000016612 | ||
Aliases: | None | ||
Description: | actin, beta [Source:HGNC Symbol;Acc:132] |
Percent Identity: | 82.58 % |
Parental protein coverage: | 88.53 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP |
MDDDIAALVV.NGS.M.KAGF.GD.AP.A.FPSI.G.P.HQGVMVGMGQKDS.V..E.QSK.GILTLK.P | |
Retrocopy | MDDDIAALVVHNGSRMGKAGFTGDNAPQAIFPSIEGCPQHQGVMVGMGQKDSCVPEETQSKKGILTLKHP |
Parental | IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK-ANREKMTQIMFETFNTPAMYVAIQAV |
IEH.IVTNWDDMEKIWHHT.Y.ELRV.PEEHPVLLT.APLNP..AN.EKMTQ.MF.TFNTPAMYVAIQAV | |
Retrocopy | IEHSIVTNWDDMEKIWHHTIYSELRVTPEEHPVLLTNAPLNPR<ANCEKMTQMMFQTFNTPAMYVAIQAV |
Parental | LSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV |
LSLYASG...GIVMDS.DG..HTVPIYEGY.LP.AIL.LDLAGRDLTDYLMKIL.ERGYSFTTTAEREIV | |
Retrocopy | LSLYASGHD-GIVMDSRDGIIHTVPIYEGYTLPDAILHLDLAGRDLTDYLMKILKERGYSFTTTAEREIV |
Parental | RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTF |
.DIKEKLCYVALDFEQE.ATA...SSL.KSYELPDGQVITIGN..F.CPE.LFQPSFLGMESC.IHE.TF | |
Retrocopy | HDIKEKLCYVALDFEQEKATADFRSSLKKSYELPDGQVITIGNKQFHCPEVLFQPSFLGMESCSIHEATF |
Parental | NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP |
NSI.KCD.DIR.DLYA.TVLSGGTT.YPGIA.RMQKEI..LAPS.MK.KIIAP | |
Retrocopy | NSITKCDIDIREDLYASTVLSGGTTRYPGIAIRMQKEIITLAPSKMKSKIIAP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |