RetrogeneDB ID: | retro_shar_742 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL861691.1:498373..498573(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPLP1 | ||
Ensembl ID: | ENSSHAG00000014818 | ||
Aliases: | None | ||
Description: | ribosomal protein, large, P1 [Source:HGNC Symbol;Acc:10372] |
Percent Identity: | 51.47 % |
Parental protein coverage: | 57.89 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | CIYSALILH-DDEVTVT-EDKINALIKAAGVNVEPFWPGLFAKALANIDIGSLICNIGVGGAPPPAGA |
CI.S.LILH.D.......ED.IN.LIK....NVEPFWP.LF.K.L..I.IGSL....G.G...P..G. | |
Retrocopy | CISSTLILHNDEAMVIK<EDNINGLIKTESINVEPFWPSLFIKTLSSINIGSLTFDTGIGRSAPETGS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |