RetrogeneDB ID: | retro_tbel_1270 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_4284:32438..32935(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000006304 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 64.33 % |
Parental protein coverage: | 80.29 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | RVHPT--ADIMPTKFDP-EIKVVY-LRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRIT |
.VHPT....I...KF.P..IK....LRCT.G.V.ATS.LAPKIG.LGL.PKKV.DDIAKATGD.K.L... | |
Retrocopy | QVHPTPVTSIILPKFNPDKIKDIA<LRCTSGKVCATSSLAPKIGLLGLPPKKVSDDIAKATGDRKRLKMI |
Parental | VKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVSIARQMRHRSLARELSGTI |
.KL..QNRQAQIEVVPSASALII.AL....RDRKKQKN.KHSGNIT...IV.I..Q......ARE.SGT. | |
Retrocopy | MKLLTQNRQAQIEVVPSASALIITALRKLLRDRKKQKNSKHSGNITSNKIVNITQQVKYQFGAREFSGTT |
Parental | KEILGTAQSVGCNVDGRHPHDIIDDINSGAV |
KEILGT.......V.GRHPHD.IDD..SGAV | |
Retrocopy | KEILGTTAQ---TVAGRHPHDSIDD-SSGAV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |