RetrogeneDB ID: | retro_tsyr_779 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_19796:14095..14833(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL7 | ||
Ensembl ID: | ENSTSYG00000006100 | ||
Aliases: | None | ||
Description: | ribosomal protein L7 [Source:HGNC Symbol;Acc:10363] |
Percent Identity: | 84.96 % |
Parental protein coverage: | 98.39 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | NAREKKKKVPAVPETLKKKRRNFAELKLKRLRKK-AQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMA |
...EKKK.VPAVPETLKKK.RNFAELK.KRLRKK.A.KML..ARRKLIYEKAKH.HK.YRQMYRTEI.MA | |
Retrocopy | SVEEKKKRVPAVPETLKKKQRNFAELKIKRLRKKFAPKML*TARRKLIYEKAKHDHKIYRQMYRTEIKMA |
Parental | RMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAW |
RMARKAGNFY.PAEPKLAFVIRIRG.NGV.PK.RKVLQLL.LR.IFNGTFVKLNKASI.MLRIVEPYIAW | |
Retrocopy | RMARKAGNFYGPAEPKLAFVIRIRGTNGVNPKARKVLQLLHLRRIFNGTFVKLNKASISMLRIVEPYIAW |
Parental | GYPNLKSVNELIYKRGYGKINKKRIALTDNSLIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFK |
G.PNLKSVNELIYKR.YGKINKKRIALTDN.L.ARSLGKYGIICMEDLIHEIY.VGK.FKEANNFLW.FK | |
Retrocopy | GDPNLKSVNELIYKRSYGKINKKRIALTDNGLMARSLGKYGIICMEDLIHEIYAVGKHFKEANNFLWAFK |
Parental | LSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN |
L....GGM..K.THFVEGGDAG.REDQI.RLIRR.N | |
Retrocopy | LPCL*GGMETKATHFVEGGDAGSREDQISRLIRRVN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |