RetrogeneDB ID: | retro_tsyr_930 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_2449:58960..59687(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL7 | ||
Ensembl ID: | ENSTSYG00000006100 | ||
Aliases: | None | ||
Description: | ribosomal protein L7 [Source:HGNC Symbol;Acc:10363] |
Percent Identity: | 92.59 % |
Parental protein coverage: | 96.79 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | KKKKVPAVPETLKKKRRNFAELKLKRLRKK-AQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMAR |
KKKKVPAVPETLKKK.RNFAELK.KRLRKK.AQKML.KARRKLIYEKAKHYHKEYRQM..TEIRMARMAR | |
Retrocopy | KKKKVPAVPETLKKK*RNFAELKIKRLRKKFAQKMLQKARRKLIYEKAKHYHKEYRQMHSTEIRMARMAR |
Parental | KAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPN |
KAGNFYVPAEPKLAFVIRIRGINGVSPKVRK.LQ.LRLRQ.FNGTFVKLNKAS.NMLRIVEP.IAWGYPN | |
Retrocopy | KAGNFYVPAEPKLAFVIRIRGINGVSPKVRKALQHLRLRQLFNGTFVKLNKASMNMLRIVEPNIAWGYPN |
Parental | LKSVNELIYKRGYGKINKKRIALTDNSLIARSLG-KYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSS |
L.S.NELIYKRGYGKINKKRIALTDN.LIA.SLG.KYGIICMEDLIHEIYTVGKRFKEANNFLWPFKL.S | |
Retrocopy | LNSANELIYKRGYGKINKKRIALTDNGLIA*SLG>KYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLTS |
Parental | PRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN |
PRGGMKKKTTHFVEG.DAGNREDQINRLIRRMN | |
Retrocopy | PRGGMKKKTTHFVEGADAGNREDQINRLIRRMN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |