RetrogeneDB ID: | retro_tsyr_1200 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_34428:14340..15066(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL7 | ||
Ensembl ID: | ENSTSYG00000006100 | ||
Aliases: | None | ||
Description: | ribosomal protein L7 [Source:HGNC Symbol;Acc:10363] |
Percent Identity: | 70.2 % |
Parental protein coverage: | 97.19 % |
Number of stop codons detected: | 5 |
Number of frameshifts detected | 2 |
Parental | EKKKKVPAVPETLKKKRRNFAELKLKRLRKKA-QKMLRKARRKL-IYEKAKHYHKEYRQMYRTEIRMARM |
E.KKK.PAVPETLKKK.RN.AELK...LR.....K......R.L.....A.HYHK.YRQMYRTEI.M.RM | |
Retrocopy | ERKKKFPAVPETLKKK*RNYAELKIRHLRRSLPHKCFKRQGRNL>LXXXAIHYHKGYRQMYRTEI*MTRM |
Parental | ARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGY |
ARKAGNFY.PAEPK.A..IRIRGIN..SPKV.KVLQL..L.QI.N.TF..LNKASIN.LR.V.PYIAWGY | |
Retrocopy | ARKAGNFYGPAEPKSAYIIRIRGINSLSPKVQKVLQL-HLCQILNRTFFNLNKASINILRMV*PYIAWGY |
Parental | PNLKSVNELIYKRGYGKINKKRIALTDNSLIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLS |
.NLKSVNE.IYK..YGKI.K..IA.T...LIA.SL.KYGIIC.EDLIHEIYTVGK.FKE..NFL.P.KLS | |
Retrocopy | LNLKSVNEPIYKCVYGKISKNQIAWTESGLIAQSLDKYGIICKEDLIHEIYTVGKCFKETDNFL*PLKLS |
Parental | SPRGGMKK-KTTHFVEGGDAGNREDQINRLIRRMN |
SP.GGMKK..TT..VE.GDAGN.E.QINRLIR.MN | |
Retrocopy | SP*GGMKK<NTTCIVEDGDAGNKENQINRLIRKMN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |