Parental gene:

RPL37, ENSSSCG00000025883

Aliases:None
Description:ribosomal protein L37 [Source:HGNC Symbol;Acc:10347]
Organism:Pig (Sus scrofa)
Coordinates:GL893678.1:23832..27212(-)


>ENSSSCG00000025883
ATGACGAAGGGAACGTCATCGTTTGGAAAGCGTCGGAATAAGACGCACACGTTGTGCCGCCGCTGTGGCTCTAAGGCCTA
CCATCTCCAGAAGTCGACCTGTGGCAAGTGTGGCTACCCTGCCAAGCGAAAGAGGAAGTATAACTGGAGTGCGAAAGCTA
AAAGACGAAACACCACCGGGACTGGTCGAATGAGGCACCTAAAAATTGTATATCGCAGATTCAGGCATGGATTCCGTGAA
GGAACAACACCTAAACCCAAGAGGGCAGCTGTTGCGGCATCCAGTTCATCTTAA

Library Parental gene expression (RPM)
SRP014902_placenta 569 .55 RPM
SRP014902_testis 2139 .24 RPM
SRP018856_adipose 1378 .84 RPM
SRP018288_kidney 345 .66 RPM
SRP018288_lung 690 .48 RPM
SRP018288_liver 317 .26 RPM
SRP018288_heart 318 .38 RPM
SRP035408_liver 476 .97 RPM
SRP035408_brain 723 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005142 ortholog_one2one 6 retrogenes
retro_btau_1430, retro_btau_1502, retro_btau_1575, retro_btau_1670, retro_btau_181, retro_btau_243,
Callithrix jacchus ENSCJAG00000007388 ortholog_one2one 10 retrogenes
retro_cjac_107, retro_cjac_1443, retro_cjac_169, retro_cjac_2091, retro_cjac_2443, retro_cjac_247, retro_cjac_2495, retro_cjac_2654, retro_cjac_2956, retro_cjac_332,
Latimeria chalumnae ENSLACG00000002787 possible_ortholog 1 retrogene
retro_lcha_6,
Loxodonta africana ENSLAFG00000030052 ortholog_one2one 13 retrogenes
retro_lafr_1101, retro_lafr_1123, retro_lafr_1125, retro_lafr_1136, retro_lafr_215, retro_lafr_374, retro_lafr_448, retro_lafr_507, retro_lafr_532, retro_lafr_619, retro_lafr_775, retro_lafr_985, retro_lafr_986,
Macaca mulatta ENSMMUG00000023807 possible_ortholog 6 retrogenes
retro_mmul_1602, retro_mmul_1672, retro_mmul_206, retro_mmul_329, retro_mmul_976, retro_mmul_997,
Monodelphis domestica ENSMODG00000020301 possible_ortholog 3 retrogenes
retro_mdom_130, retro_mdom_1843, retro_mdom_942,
Mus musculus ENSMUSG00000041841 ortholog_one2one 28 retrogenes
retro_mmus_1333, retro_mmus_1360, retro_mmus_1425, retro_mmus_1560, retro_mmus_1717, retro_mmus_1732, retro_mmus_1804, retro_mmus_1813, retro_mmus_2067, retro_mmus_2379, retro_mmus_2385, retro_mmus_2513, retro_mmus_2559, retro_mmus_2575, retro_mmus_2691, retro_mmus_2811, retro_mmus_2838, retro_mmus_3090, retro_mmus_3222, retro_mmus_3343, retro_mmus_3345, retro_mmus_3364, retro_mmus_3455, retro_mmus_3493, retro_mmus_3503, retro_mmus_3504, retro_mmus_3674, retro_mmus_438,
Oryctolagus cuniculus ENSOCUG00000029674 ortholog_one2one 11 retrogenes
retro_ocun_1063, retro_ocun_1269, retro_ocun_1476, retro_ocun_1491, retro_ocun_1514, retro_ocun_1870, retro_ocun_295, retro_ocun_683, retro_ocun_771, retro_ocun_879, retro_ocun_956,
Otolemur garnettii ENSOGAG00000034300 possible_ortholog 7 retrogenes
retro_ogar_127, retro_ogar_1308, retro_ogar_1662, retro_ogar_1667, retro_ogar_2670, retro_ogar_662, retro_ogar_76,
Rattus norvegicus ENSRNOG00000012538 ortholog_one2many 6 retrogenes
retro_rnor_171, retro_rnor_181, retro_rnor_220, retro_rnor_246, retro_rnor_321, retro_rnor_325,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_767 71.25 82.47
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2. retro_sscr_872 73.91 70.10
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3. retro_sscr_1004 75.28 90.72
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4. retro_sscr_1220 77.78 100.00
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5. retro_sscr_1221 77.78 100.00
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Download FASTA sequences of all ENSSSCG00000025883 retrocopies