RetrogeneDB ID: | retro_lafr_448 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_17:22009984..22010263(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37 | ||
Ensembl ID: | ENSLAFG00000030052 | ||
Aliases: | None | ||
Description: | Ribosomal protein L37 [Source:UniProtKB/TrEMBL;Acc:G3U3B7] |
Percent Identity: | 74.19 % |
Parental protein coverage: | 95.88 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 0 |
Parental | TKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIVY |
TKG.SSFGK.RNK.H.LC...GSKAYH.Q.STCGKCGYP.K.KRKYN.SAKAKR.NTT.TGRMR.LKIVY | |
Retrocopy | TKGMSSFGK*RNKMHALC**FGSKAYHFQNSTCGKCGYPVKCKRKYN*SAKAKRQNTTDTGRMRYLKIVY |
Parental | RRFRHGFREGTTPKPKRAAVAAS |
.RF.H.F..GTTPK.KRAA...S | |
Retrocopy | NRFKHEFCKGTTPKSKRAAPSSS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |