RetrogeneDB ID: | retro_lafr_1123 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_71:8986368..8986611(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37 | ||
Ensembl ID: | ENSLAFG00000030052 | ||
Aliases: | None | ||
Description: | Ribosomal protein L37 [Source:UniProtKB/TrEMBL;Acc:G3U3B7] |
Percent Identity: | 82.72 % |
Parental protein coverage: | 83.51 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | TLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFREGTTPKP |
TLCRR.G.KAYHLQ.STCGKCG.PAK.KRK.N.SAKAKR..TTGTG.MRHLKIVY.RF.HGF.EGTT.KP | |
Retrocopy | TLCRRYGCKAYHLQRSTCGKCGCPAKCKRKSN*SAKAKR*KTTGTG*MRHLKIVYCRFSHGFCEGTTSKP |
Parental | KRAAVAASSSS |
KRAAVAASSSS | |
Retrocopy | KRAAVAASSSS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |