RetrogeneDB ID: | retro_lafr_215 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_1:98025861..98026135(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37 | ||
Ensembl ID: | ENSLAFG00000030052 | ||
Aliases: | None | ||
Description: | Ribosomal protein L37 [Source:UniProtKB/TrEMBL;Acc:G3U3B7] |
Percent Identity: | 67.02 % |
Parental protein coverage: | 94.85 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | TSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRH-LKIVYRR |
TSSF.K...K.HTLC..CGS.AYHLQK..CG.CG.P.K.KRKYN.SAKAK..NTTGTG...H.LKIVY.R | |
Retrocopy | TSSFAKCHKKMHTLCSCCGSMAYHLQKLICGECGSPGKHKRKYNSSAKAKG*NTTGTGQIGH<LKIVYHR |
Parental | FRHGFREGTTPK-PKRAAVAASSS |
FR.G..E.TT...PK.AA.AASSS | |
Retrocopy | FRLGVHE*TTFN<PKKAAIAASSS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |