Parental gene: | RPS4X, ENSTBEG00000002918 |
| Aliases: | None |
| Description: | ribosomal protein S4, X-linked [Source:HGNC Symbol;Acc:10424] |
| Organism: | Treeshrew (Tupaia belangeri) |
| Coordinates: | scaffold_148361:41341..46724(-) |
>ENSTBEG00000002918
ATGGCTCGGGGCCCTAAGAAGCATCTGAAGCGGGTTGCAGCTCCAAAACATTGGATGCTAGATAAATTGACCGGTGTGTT
TGCCCCTCGTCCATCCACTGGTCCCCACAAGCTGAGAGAATGTCTTCCTCTCATCATTTTCCTAAGGAACAGACTTAAGT
ACGCTTTAACAGGAGACGAAGTAAAGAAGATCTGCATGCAGCGGTTCATTAAGATTGATGGCAAAGTCCGTACTGACATA
ACCTACCCTGCTGGTTTTATGGATGTCATCAGCATTGACAAGACCGGAGAGAATTTCCGTCTGATCTATGACACCAAGGG
TCGTTTTGCTGTCCATCGTATTACACCTGAGGAGGCCAAGTACAAGTTGTGCAAAGTGAGAAAAATCTTTGTGGGCACAA
AAGGAATCCCTCATTTGGTGACGCATGATGCTCGTACCATCCGCTACCCAGATCCTCTCATCAAGGTGAACGACACCATT
CAGATTGATTTGGAGACTGGCAAGATTACTGATTTTATCAAGTTTGATACCGGTAACCTGTGTATGGTGACAGGAGGTGC
TAACTTGGGAAGAATTGGTGTGATCACCAACAGAGAGAGGCATCCTGGCTCTTTTGATGTGGTTCATGTGAAAGATGCCA
ATGGCAACAGTTTTGCCACTCGGCTCTCCAACATTTTTGTTATTGGCAAAGGAAACAAGCCATGGATTTCTCTTCCCCGG
GGAAAAGGTATCCGCCTCACCATTGCCGAAGAGAGAGACAAGAGACTGGCAGCCAAACAGAGCAGTGGGTGA
ATGGCTCGGGGCCCTAAGAAGCATCTGAAGCGGGTTGCAGCTCCAAAACATTGGATGCTAGATAAATTGACCGGTGTGTT
TGCCCCTCGTCCATCCACTGGTCCCCACAAGCTGAGAGAATGTCTTCCTCTCATCATTTTCCTAAGGAACAGACTTAAGT
ACGCTTTAACAGGAGACGAAGTAAAGAAGATCTGCATGCAGCGGTTCATTAAGATTGATGGCAAAGTCCGTACTGACATA
ACCTACCCTGCTGGTTTTATGGATGTCATCAGCATTGACAAGACCGGAGAGAATTTCCGTCTGATCTATGACACCAAGGG
TCGTTTTGCTGTCCATCGTATTACACCTGAGGAGGCCAAGTACAAGTTGTGCAAAGTGAGAAAAATCTTTGTGGGCACAA
AAGGAATCCCTCATTTGGTGACGCATGATGCTCGTACCATCCGCTACCCAGATCCTCTCATCAAGGTGAACGACACCATT
CAGATTGATTTGGAGACTGGCAAGATTACTGATTTTATCAAGTTTGATACCGGTAACCTGTGTATGGTGACAGGAGGTGC
TAACTTGGGAAGAATTGGTGTGATCACCAACAGAGAGAGGCATCCTGGCTCTTTTGATGTGGTTCATGTGAAAGATGCCA
ATGGCAACAGTTTTGCCACTCGGCTCTCCAACATTTTTGTTATTGGCAAAGGAAACAAGCCATGGATTTCTCTTCCCCGG
GGAAAAGGTATCCGCCTCACCATTGCCGAAGAGAGAGACAAGAGACTGGCAGCCAAACAGAGCAGTGGGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000014601 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000018800 | ortholog_one2one | 5 retrogenes | |
| Canis familiaris | ENSCAFG00000017151 | possible_ortholog | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000006337 | possible_ortholog | 3 retrogenes | |
| Equus caballus | ENSECAG00000010852 | possible_ortholog | 6 retrogenes | |
| Felis catus | ENSFCAG00000012041 | ortholog_one2one | 11 retrogenes | |
| Homo sapiens | ENSG00000129824 | possible_ortholog | 1 retrogene | |
| Meleagris gallopavo | ENSMGAG00000009671 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000003295 | ortholog_one2one | 7 retrogenes | |
| Monodelphis domestica | ENSMODG00000011070 | possible_ortholog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000005294 | possible_ortholog | 11 retrogenes | |
| Otolemur garnettii | ENSOGAG00000011808 | possible_ortholog | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000022470 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000003201 | possible_ortholog | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000010952 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tbel_310 | 77.78 | 57.41 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tbel_511 | 82.50 | 75.67 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_tbel_877 | 60.38 | 79.47 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_tbel_1108 | 67.60 | 66.54 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_tbel_1367 | 70.85 | 74.90 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_tbel_1465 | 77.58 | 61.22 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_tbel_1798 | 80.82 | 83.27 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_tbel_2241 | 80.08 | 98.86 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_tbel_2659 | 93.16 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_tbel_2711 | 90.53 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_tbel_2715 | 93.92 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_tbel_2722 | 86.16 | 60.08 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_tbel_2743 | 85.78 | 85.17 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_tbel_2944 | 73.31 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 15. | retro_tbel_3172 | 86.90 | 86.31 | Please wait, loading | Please wait, loading | Please wait, loading |
| 16. | retro_tbel_3232 | 77.19 | 64.64 | Please wait, loading | Please wait, loading | Please wait, loading |
| 17. | retro_tbel_4263 | 91.07 | 63.50 | Please wait, loading | Please wait, loading | Please wait, loading |
| 18. | retro_tbel_4569 | 84.03 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 19. | retro_tbel_4572 | 94.72 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 20. | retro_tbel_4648 | 87.50 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTBEG00000002918 retrocopies