RetrogeneDB ID: | retro_mluc_1709 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429889:2225199..2225678(+) | ||
Located in intron of: | ENSMLUG00000009323 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL15 | ||
Ensembl ID: | ENSMLUG00000013809 | ||
Aliases: | None | ||
Description: | Ribosomal protein L15 [Source:UniProtKB/TrEMBL;Acc:G1PNN2] |
Percent Identity: | 91.93 % |
Parental protein coverage: | 77.94 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLS-ALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRG |
MGAYKYIQELWRKKQSDVMRFLLRVRC.QYR.L.......PRPTRPDKARRL.YKAKQ.YVIYRIRVRRG | |
Retrocopy | MGAYKYIQELWRKKQSDVMRFLLRVRC*QYRHLPLCAPQGPRPTRPDKARRLSYKAKQDYVIYRIRVRRG |
Parental | G-RKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPF |
G.RKRPVPKGAT.GKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPF | |
Retrocopy | G<RKRPVPKGAT*GKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPF |
Parental | HKAIRRNPDTQWITKPVHKHR |
HKAIRRNPDTQWITKPVHKHR | |
Retrocopy | HKAIRRNPDTQWITKPVHKHR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |