RetrogeneDB ID: | retro_mluc_748 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429774:7680496..7681103(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL15 | ||
Ensembl ID: | ENSMLUG00000013809 | ||
Aliases: | None | ||
Description: | Ribosomal protein L15 [Source:UniProtKB/TrEMBL;Acc:G1PNN2] |
Percent Identity: | 87.08 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 5 |
Parental | MGAYKYIQELWRKKQ-SDVMRFLLRVRCWQYRQLSALHRAPRPTRP-DKAR-RLGYKAKQGYVIYRIRVR |
MGAY.YIQE..RK...SDV.RFLLRVRCWQYRQLSALH..PR..RP.DKAR..LGYKAKQG.VIYRIRVR | |
Retrocopy | MGAYRYIQEPGRKRH<SDVLRFLLRVRCWQYRQLSALHGGPRSIRP<DKAR<QLGYKAKQG*VIYRIRVR |
Parental | RGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDP |
RGGRK.PVPKGATYG.PVHHGVNQL.FARSLQSVA.ERAGRHCGALR.LNSYWVGEDSTYKFFEVILIDP | |
Retrocopy | RGGRKSPVPKGATYGQPVHHGVNQLEFARSLQSVAKERAGRHCGALRALNSYWVGEDSTYKFFEVILIDP |
Parental | FHKAIRRNPDTQWITKPVHKHREMRGLTSA-GRKS-RGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR |
FHKAIRRNPDT.WIT.PVHKHREMRGLTSA.GRKS..GLGKGHKFH.TIGGSRRAAWRRRNTLQLH.YR | |
Retrocopy | FHKAIRRNPDTRWITRPVHKHREMRGLTSA<GRKS<PGLGKGHKFHRTIGGSRRAAWRRRNTLQLHHYR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |