RetrogeneDB ID: | retro_mluc_714 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429772:13261568..13262172(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL15 | ||
Ensembl ID: | ENSMLUG00000013809 | ||
Aliases: | None | ||
Description: | Ribosomal protein L15 [Source:UniProtKB/TrEMBL;Acc:G1PNN2] |
Percent Identity: | 70.67 % |
Parental protein coverage: | 99.51 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 5 |
Parental | MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPT-RPDKARRLGYKAKQGYVIYRIRVRRG |
M..Y.YIQELWRK...DV..FL.RV.CWQYRQ.S.LHRAP.P..R...A..LGY.AK.GYVIYRI.V..G | |
Retrocopy | MDTYTYIQELWRKDHPDVNCFLPRVHCWQYRQQSVLHRAPFPS<RLHNAHKLGYRAKGGYVIYRIHVHCG |
Parental | GRKRPVPK-GATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDST-YKFFEVILIDP |
G.K.PVP..G.TYGKPVHHGVNQL.F..SLQ.VAE..AGRHC..L.VL.SYW..EDST..KF.EVILIDP | |
Retrocopy | GCKNPVPS<GVTYGKPVHHGVNQLEFTPSLQFVAEV*AGRHCRTLWVLDSYWLDEDST<TKFSEVILIDP |
Parental | FHK-AIRRNPDT-QWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRY |
FH..AIRRN.DT.QWITKP.HKHREM.GL.SAGRK..G.G.G..FHHTIGGSR.AAWRR.NTLQLH.Y | |
Retrocopy | FHR<AIRRNSDT<QWITKPGHKHREMQGLLSAGRKHCGCGEGRTFHHTIGGSRCAAWRRHNTLQLHCY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |