Parental gene:

ENSOGAG00000025933

Aliases:None
Description:None
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873537.1:6154714..6157121(+)


>ENSOGAG00000025933
ATGGCTCGAACCAAGCAGACCGCTCGTAAATCCACTGGTGGGAAAGCCCCCCGCAAACAGCTGGCTACCAAAGCTGCCAG
GAAAAGCGCTCCCTCTACCGGCGGGGTGAAGAAACCTCATCGCTACAGGCCCGGCACCGTTGCGCTCAGAGAGATTCGTC
GTTACCAGAAATCGACTGAGCTGCTCATCCGAAAGCTGCCTTTCCAGAGGTTGGTGAGGGAGATCGCCCAGGATTTCAAA
ACCGACTTGAGGTTTCAGAGTGCGGCCATTGGTGCGCTTCAGGAGGCTAGTGAAGCGTACCTGGTGGGTTTGTTTGAAGA
TACTAATCTGTGTGCCATCCACGCTAAGAGAGTCACCATCATGCCCAAAGACATCCAGTTGGCTCGCCGGATACGGGGAG
AGAGAGCTTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000014588 possible_ortholog 7 retrogenes
retro_amel_1023, retro_amel_1026, retro_amel_144, retro_amel_570, retro_amel_687, retro_amel_711, retro_amel_903,
Bos taurus ENSBTAG00000024561 possible_ortholog 3 retrogenes
retro_btau_156, retro_btau_204, retro_btau_47,
Canis familiaris ENSCAFG00000004916 possible_ortholog 2 retrogenes
retro_cfam_1117, retro_cfam_622,
Canis familiaris ENSCAFG00000016119 possible_ortholog 4 retrogenes
retro_cfam_168, retro_cfam_1845, retro_cfam_650, retro_cfam_673,
Dipodomys ordii ENSDORG00000008132 ortholog_one2one 9 retrogenes
retro_dord_238, retro_dord_283, retro_dord_43, retro_dord_589, retro_dord_678, retro_dord_685, retro_dord_719, retro_dord_765, retro_dord_774,
Erinaceus europaeus ENSEEUG00000013796 possible_ortholog 1 retrogene
retro_eeur_2,
Felis catus ENSFCAG00000003617 possible_ortholog 4 retrogenes
retro_fcat_1085, retro_fcat_1953, retro_fcat_592, retro_fcat_830,
Felis catus ENSFCAG00000030424 possible_ortholog 5 retrogenes
retro_fcat_1251, retro_fcat_1532, retro_fcat_1533, retro_fcat_2011, retro_fcat_674,
Homo sapiens ENSG00000163041 possible_ortholog 5 retrogenes
retro_hsap_2825, retro_hsap_2889, retro_hsap_3102, retro_hsap_3214, retro_hsap_4800,
Gorilla gorilla ENSGGOG00000022526 ortholog_one2one 11 retrogenes
retro_ggor_1179, retro_ggor_1809, retro_ggor_1837, retro_ggor_1919, retro_ggor_2003, retro_ggor_2837, retro_ggor_2956, retro_ggor_3082, retro_ggor_393, retro_ggor_736, retro_ggor_944,
Gadus morhua ENSGMOG00000014306 possible_ortholog 1 retrogene
retro_gmor_9,
Macropus eugenii ENSMEUG00000004090 possible_ortholog 5 retrogenes
retro_meug_1041, retro_meug_1065, retro_meug_1819, retro_meug_281, retro_meug_573,
Microcebus murinus ENSMICG00000010469 possible_ortholog 6 retrogenes
retro_mmur_1185, retro_mmur_1243, retro_mmur_1249, retro_mmur_1543, retro_mmur_827, retro_mmur_83,
Macaca mulatta ENSMMUG00000031483 possible_ortholog 9 retrogenes
retro_mmul_108, retro_mmul_147, retro_mmul_201, retro_mmul_213, retro_mmul_215, retro_mmul_286, retro_mmul_337, retro_mmul_346, retro_mmul_7,
Monodelphis domestica ENSMODG00000005983 possible_ortholog 3 retrogenes
retro_mdom_1037, retro_mdom_1132, retro_mdom_175,
Mustela putorius furo ENSMPUG00000013811 possible_ortholog 3 retrogenes
retro_mputfur_1159, retro_mputfur_787, retro_mputfur_881,
Mus musculus ENSMUSG00000016559 ortholog_one2one 18 retrogenes
retro_mmus_1058, retro_mmus_1188, retro_mmus_1269, retro_mmus_1535, retro_mmus_1635, retro_mmus_2021, retro_mmus_2083, retro_mmus_2377, retro_mmus_2771, retro_mmus_2867, retro_mmus_2972, retro_mmus_3002, retro_mmus_3144, retro_mmus_3477, retro_mmus_3667, retro_mmus_896, retro_mmus_961, retro_mmus_962,
Nomascus leucogenys ENSNLEG00000001577 ortholog_one2one 2 retrogenes
retro_nleu_25, retro_nleu_35,
Otolemur garnettii ENSOGAG00000024312 within_species_paralog 11 retrogenes
retro_ogar_1086, retro_ogar_1790, retro_ogar_1863, retro_ogar_2364, retro_ogar_2463, retro_ogar_2581, retro_ogar_2746, retro_ogar_3415, retro_ogar_478, retro_ogar_842, retro_ogar_955,
Oreochromis niloticus ENSONIG00000015805 possible_ortholog 7 retrogenes
retro_onil_45, retro_onil_47, retro_onil_51, retro_onil_54, retro_onil_61, retro_onil_65, retro_onil_69,
Procavia capensis ENSPCAG00000004484 possible_ortholog 2 retrogenes
retro_pcap_171, retro_pcap_95,
Pongo abelii ENSPPYG00000000168 ortholog_one2one 14 retrogenes
retro_pabe_1285, retro_pabe_2151, retro_pabe_2204, retro_pabe_2252, retro_pabe_2391, retro_pabe_2679, retro_pabe_2722, retro_pabe_2805, retro_pabe_2938, retro_pabe_3078, retro_pabe_323, retro_pabe_3420, retro_pabe_3637, retro_pabe_3697,
Pongo abelii ENSPPYG00000008636 possible_ortholog 1 retrogene
retro_pabe_2662,
Pan troglodytes ENSPTRG00000002045 possible_ortholog 20 retrogenes
retro_ptro_1045, retro_ptro_1704, retro_ptro_1770, retro_ptro_1867, retro_ptro_1954, retro_ptro_2098, retro_ptro_2183, retro_ptro_2228, retro_ptro_2229, retro_ptro_2230, retro_ptro_2232, retro_ptro_2233, retro_ptro_2363, retro_ptro_279, retro_ptro_2834, retro_ptro_2936, retro_ptro_2978, retro_ptro_300, retro_ptro_3111, retro_ptro_3164,
Pteropus vampyrus ENSPVAG00000008459 ortholog_one2many 2 retrogenes
retro_pvam_218, retro_pvam_52,
Rattus norvegicus ENSRNOG00000003220 ortholog_one2one 4 retrogenes
retro_rnor_121, retro_rnor_191, retro_rnor_336, retro_rnor_44,
Sarcophilus harrisii ENSSHAG00000005807 possible_ortholog 1 retrogene
retro_shar_565,
Sus scrofa ENSSSCG00000023971 possible_ortholog 2 retrogenes
retro_sscr_31, retro_sscr_712,
Tursiops truncatus ENSTTRG00000015889 possible_ortholog 7 retrogenes
retro_ttru_1094, retro_ttru_1306, retro_ttru_18, retro_ttru_451, retro_ttru_738, retro_ttru_814, retro_ttru_92,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_42 97.67 94.85
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2. retro_ogar_733 74.81 98.53
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3. retro_ogar_937 94.81 99.26
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4. retro_ogar_952 90.44 100.00
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5. retro_ogar_1285 91.30 100.00
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6. retro_ogar_1364 91.91 100.00
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7. retro_ogar_1449 75.36 100.00
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8. retro_ogar_1575 85.29 99.26
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9. retro_ogar_1576 85.29 99.26
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10. retro_ogar_2200 76.69 97.79
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11. retro_ogar_2316 84.40 79.41
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12. retro_ogar_2449 88.15 99.26
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13. retro_ogar_2634 78.57 100.00
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14. retro_ogar_3235 95.59 100.00
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Download FASTA sequences of all ENSOGAG00000025933 retrocopies