RetrogeneDB ID: | retro_fcat_674 | ||
Retrocopylocation | Organism: | Cat (Felis catus) | |
Coordinates: | B1:187711047..187711329(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSFCAG00000030424 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 58.51 % |
Parental protein coverage: | 68.38 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | KAPRKQLATKAARKSAP-STGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDL |
KA.R.Q....A.....P.STG..KKPH.YRPG.VALR.I....K...LLI.KLP.Q.L..EI...FKTDL | |
Retrocopy | KATR*QQGPRASPNNGPPSTGRLKKPHPYRPGAVALRQISHF*KHADLLICKLPSQCLG*EIVPRFKTDL |
Parental | RFQSAAIGALQEASEAYLVGLFED |
.F..AAIGALQEAS.A.LV.L.ED | |
Retrocopy | HFLTAAIGALQEASKAHLVSLSED |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP017611_brain | 0 .00 RPM | 170 .44 RPM |
SRP017611_kidney | 0 .00 RPM | 229 .61 RPM |
SRP017611_liver | 0 .00 RPM | 83 .70 RPM |