RetrogeneDB - Parental gene ENSOGAG00000024312 details

							
>ENSOGAG00000024312
ATGGCTCGTACAAAGCAGACTGCCCGCAAATCCACCGGTGGTAAAGCACCCAGGAAGCAACTGGCTACAAAAGCCGCTCG

CAAGAGTGCGCCCTCTACTGGAGGGGTGAAGAAACCTCATCGCTACAGGCCTGGTACTGTGGCACTCCGTGAAATAAGAC

GTTATCAGAAGTCCACTGAACTTCTGATTCGCAAACTTCCTTTCCAGCGTCTGGTGCGAGAAATTGCTCAGGACTTTAAG

ACAGATCTGCGCTTCCAGAGCGCAGCTATTGGTGCTTTGCAGGAGGCAAGTGAGGCCTATCTGGTTGGCCTTTTTGAAGA

CACCAACCTGTGTGCTATCCATGCCAAACGTGTAACAATTATGCCAAAAGACATCCAGCTAGCACGCCGCATACGTGGAG

AACGTGCTTAA

Species	Parental gene accession	Homology type	Retrogenes number
Ailuropoda melanoleuca	ENSAMEG00000014588	possible_ortholog	7 retrogenes	retro_amel_1023, retro_amel_1026, retro_amel_144, retro_amel_570, retro_amel_687, retro_amel_711, retro_amel_903,
Bos taurus	ENSBTAG00000024561	possible_ortholog	3 retrogenes	retro_btau_156, retro_btau_204, retro_btau_47,
Canis familiaris	ENSCAFG00000004916	possible_ortholog	2 retrogenes	retro_cfam_1117, retro_cfam_622,
Canis familiaris	ENSCAFG00000016119	possible_ortholog	4 retrogenes	retro_cfam_168, retro_cfam_1845, retro_cfam_650, retro_cfam_673,
Dipodomys ordii	ENSDORG00000008132	possible_ortholog	9 retrogenes	retro_dord_238, retro_dord_283, retro_dord_43, retro_dord_589, retro_dord_678, retro_dord_685, retro_dord_719, retro_dord_765, retro_dord_774,
Erinaceus europaeus	ENSEEUG00000013796	possible_ortholog	1 retrogene	retro_eeur_2,
Felis catus	ENSFCAG00000003617	possible_ortholog	4 retrogenes	retro_fcat_1085, retro_fcat_1953, retro_fcat_592, retro_fcat_830,
Felis catus	ENSFCAG00000030424	possible_ortholog	5 retrogenes	retro_fcat_1251, retro_fcat_1532, retro_fcat_1533, retro_fcat_2011, retro_fcat_674,
Homo sapiens	ENSG00000163041	ortholog_one2one	5 retrogenes	retro_hsap_2825, retro_hsap_2889, retro_hsap_3102, retro_hsap_3214, retro_hsap_4800,
Gorilla gorilla	ENSGGOG00000022526	possible_ortholog	11 retrogenes	retro_ggor_1179, retro_ggor_1809, retro_ggor_1837, retro_ggor_1919, retro_ggor_2003, retro_ggor_2837, retro_ggor_2956, retro_ggor_3082, retro_ggor_393, retro_ggor_736, retro_ggor_944,
Gadus morhua	ENSGMOG00000014306	possible_ortholog	1 retrogene	retro_gmor_9,
Macropus eugenii	ENSMEUG00000004090	possible_ortholog	5 retrogenes	retro_meug_1041, retro_meug_1065, retro_meug_1819, retro_meug_281, retro_meug_573,
Macaca mulatta	ENSMMUG00000031483	possible_ortholog	9 retrogenes	retro_mmul_108, retro_mmul_147, retro_mmul_201, retro_mmul_213, retro_mmul_215, retro_mmul_286, retro_mmul_337, retro_mmul_346, retro_mmul_7,
Monodelphis domestica	ENSMODG00000005983	possible_ortholog	3 retrogenes	retro_mdom_1037, retro_mdom_1132, retro_mdom_175,
Mustela putorius furo	ENSMPUG00000013811	possible_ortholog	3 retrogenes	retro_mputfur_1159, retro_mputfur_787, retro_mputfur_881,
Mus musculus	ENSMUSG00000016559	possible_ortholog	18 retrogenes	retro_mmus_1058, retro_mmus_1188, retro_mmus_1269, retro_mmus_1535, retro_mmus_1635, retro_mmus_2021, retro_mmus_2083, retro_mmus_2377, retro_mmus_2771, retro_mmus_2867, retro_mmus_2972, retro_mmus_3002, retro_mmus_3144, retro_mmus_3477, retro_mmus_3667, retro_mmus_896, retro_mmus_961, retro_mmus_962,
Nomascus leucogenys	ENSNLEG00000001577	possible_ortholog	2 retrogenes	retro_nleu_25, retro_nleu_35,
Otolemur garnettii	ENSOGAG00000025933	within_species_paralog	14 retrogenes	retro_ogar_1285, retro_ogar_1364, retro_ogar_1449, retro_ogar_1575, retro_ogar_1576, retro_ogar_2200, retro_ogar_2316, retro_ogar_2449, retro_ogar_2634, retro_ogar_3235, retro_ogar_42, retro_ogar_733, retro_ogar_937, retro_ogar_952,
Oreochromis niloticus	ENSONIG00000015805	possible_ortholog	7 retrogenes	retro_onil_45, retro_onil_47, retro_onil_51, retro_onil_54, retro_onil_61, retro_onil_65, retro_onil_69,
Pongo abelii	ENSPPYG00000000168	possible_ortholog	14 retrogenes	retro_pabe_1285, retro_pabe_2151, retro_pabe_2204, retro_pabe_2252, retro_pabe_2391, retro_pabe_2679, retro_pabe_2722, retro_pabe_2805, retro_pabe_2938, retro_pabe_3078, retro_pabe_323, retro_pabe_3420, retro_pabe_3637, retro_pabe_3697,
Pongo abelii	ENSPPYG00000008636	possible_ortholog	1 retrogene	retro_pabe_2662,
Pan troglodytes	ENSPTRG00000002045	possible_ortholog	20 retrogenes	retro_ptro_1045, retro_ptro_1704, retro_ptro_1770, retro_ptro_1867, retro_ptro_1954, retro_ptro_2098, retro_ptro_2183, retro_ptro_2228, retro_ptro_2229, retro_ptro_2230, retro_ptro_2232, retro_ptro_2233, retro_ptro_2363, retro_ptro_279, retro_ptro_2834, retro_ptro_2936, retro_ptro_2978, retro_ptro_300, retro_ptro_3111, retro_ptro_3164,
Pteropus vampyrus	ENSPVAG00000008459	possible_ortholog	2 retrogenes	retro_pvam_218, retro_pvam_52,
Rattus norvegicus	ENSRNOG00000003220	possible_ortholog	4 retrogenes	retro_rnor_121, retro_rnor_191, retro_rnor_336, retro_rnor_44,
Sus scrofa	ENSSSCG00000023971	possible_ortholog	2 retrogenes	retro_sscr_31, retro_sscr_712,
Tursiops truncatus	ENSTTRG00000015889	possible_ortholog	7 retrogenes	retro_ttru_1094, retro_ttru_1306, retro_ttru_18, retro_ttru_451, retro_ttru_738, retro_ttru_814, retro_ttru_92,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_ogar_478	89.13	100.00	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_ogar_842	79.71	100.00	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_ogar_955	64.29	79.41	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_ogar_1086	87.50	100.00	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_ogar_1790	77.21	97.79	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_ogar_1863	89.71	100.00	Please wait, loading	Please wait, loading	Please wait, loading
7.	retro_ogar_2364	93.38	100.00	Please wait, loading	Please wait, loading	Please wait, loading
8.	retro_ogar_2463	93.44	89.71	Please wait, loading	Please wait, loading	Please wait, loading
9.	retro_ogar_2581	86.03	100.00	Please wait, loading	Please wait, loading	Please wait, loading
10.	retro_ogar_2746	91.79	98.53	Please wait, loading	Please wait, loading	Please wait, loading
11.	retro_ogar_3415	87.31	97.79	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSOGAG00000024312 retrocopies

Parental gene:	H3F3A, ENSOGAG00000024312
Aliases:	None
Description:	H3 histone, family 3A [Source:HGNC Symbol;Acc:4764]
Organism:	*Bushbaby (Otolemur garnettii)*
Coordinates:	GL873564.1:9759560..9769878(-)

Parental gene:

H3F3A, ENSOGAG00000024312