Parental gene:

ENSCAFG00000016119

Aliases:None
Description:Histone H3 [Source:UniProtKB/TrEMBL;Acc:E2R6K5]
Organism:Dog (Canis familiaris)
Coordinates:7:38797708..38805467(-)


>ENSCAFG00000016119
ATGGCTCGTACAAAGCAGACTGCCCGCAAATCGACCGGTGGTAAAGCACCGAGGAAGCAACTGGCTACAAAAGCCGCTCG
CAAGAGTGCGCCCTCTACTGGAGGGGTGAAGAAACCTCATCGTTACAGGCCTGGTACTGTGGCACTCCGTGAAATTAGAC
GTTATCAGAAGTCCACTGAACTTCTGATCCGCAAACTTCCTTTCCAGCGTCTGGTGCGAGAAATTGCTCAGGACTTCAAA
ACAGATCTGCGCTTCCAGAGTGCAGCTATTGGTGCTTTGCAGGAGGCAAGTGAGGCCTATCTGGTGGGCCTCTTTGAAGA
CACCAACCTGTGTGCTATCCATGCCAAACGTGTCACAATTATGCCAAAAGACATCCAGCTAGCACGCCGCATACGTGGAG
AACGTGCTTAA

Library Parental gene expression (RPM)
SRP017611_brain 31 .36 RPM
SRP017611_kidney 173 .68 RPM
SRP017611_liver 42 .35 RPM
SRP012049_cerebellum 244 .68 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000014588 possible_ortholog 7 retrogenes
Bos taurus ENSBTAG00000024561 possible_ortholog 3 retrogenes
Canis familiaris ENSCAFG00000004916 within_species_paralog 2 retrogenes
Dipodomys ordii ENSDORG00000008132 possible_ortholog 9 retrogenes
Erinaceus europaeus ENSEEUG00000013796 ortholog_many2many 1 retrogene
Felis catus ENSFCAG00000003617 possible_ortholog 4 retrogenes
Felis catus ENSFCAG00000030424 possible_ortholog 5 retrogenes
Homo sapiens ENSG00000163041 possible_ortholog 5 retrogenes
Gorilla gorilla ENSGGOG00000022526 possible_ortholog 11 retrogenes
Gadus morhua ENSGMOG00000014306 possible_ortholog 1 retrogene
Macropus eugenii ENSMEUG00000004090 ortholog_one2many 5 retrogenes
Microcebus murinus ENSMICG00000010469 possible_ortholog 6 retrogenes
Macaca mulatta ENSMMUG00000031483 ortholog_one2many 9 retrogenes
Monodelphis domestica ENSMODG00000005983 possible_ortholog 3 retrogenes
Mustela putorius furo ENSMPUG00000013811 possible_ortholog 3 retrogenes
Mus musculus ENSMUSG00000016559 possible_ortholog 18 retrogenes
Nomascus leucogenys ENSNLEG00000001577 possible_ortholog 2 retrogenes
Otolemur garnettii ENSOGAG00000024312 possible_ortholog 11 retrogenes
Otolemur garnettii ENSOGAG00000025933 possible_ortholog 14 retrogenes
Oreochromis niloticus ENSONIG00000015805 ortholog_one2many 7 retrogenes
Procavia capensis ENSPCAG00000004484 possible_ortholog 2 retrogenes
Pongo abelii ENSPPYG00000000168 possible_ortholog 14 retrogenes
Pongo abelii ENSPPYG00000008636 possible_ortholog 1 retrogene
Pan troglodytes ENSPTRG00000002045 possible_ortholog 20 retrogenes
Pteropus vampyrus ENSPVAG00000008459 possible_ortholog 2 retrogenes
Rattus norvegicus ENSRNOG00000003220 possible_ortholog 4 retrogenes
Sarcophilus harrisii ENSSHAG00000005807 possible_ortholog 1 retrogene
Sus scrofa ENSSSCG00000023971 ortholog_one2many 2 retrogenes
Tursiops truncatus ENSTTRG00000015889 possible_ortholog 7 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_168 94.85 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_cfam_650 68.18 94.12
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_cfam_673 70.00 87.50
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_cfam_1845 65.15 96.32
Please wait, loading
Please wait, loading
Please wait, loading

Download FASTA sequences of all ENSCAFG00000016119 retrocopies