RetrogeneDB ID: | retro_ogar_478 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873522.1:13319678..13320086(+) | ||
Located in intron of: | ENSOGAG00000007645 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | H3F3A | ||
Ensembl ID: | ENSOGAG00000024312 | ||
Aliases: | None | ||
Description: | H3 histone, family 3A [Source:HGNC Symbol;Acc:4764] |
Percent Identity: | 89.13 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALRE-IRRYQKSTELLIRKLPFQ |
MARTKQTARKSTG.KAPRKQLATKA.RKSAPSTGGVKKPHRY.PGTVALR..I.RYQKSTELLIRKLPFQ | |
Retrocopy | MARTKQTARKSTGAKAPRKQLATKATRKSAPSTGGVKKPHRYWPGTVALRD>IKRYQKSTELLIRKLPFQ |
Parental | RLVREIAQDFKTDLRFQSAAIGALQEASEAY-LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA |
RLVR.IAQ.FKTDLRFQS.AIGALQEASEAY..VGLFEDTNLCA.HAK.VTIMPKDIQLAR.IRGE.A | |
Retrocopy | RLVRQIAQNFKTDLRFQSTAIGALQEASEAY<WVGLFEDTNLCATHAKHVTIMPKDIQLARHIRGEHA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |