RetrogeneDB ID: | retro_ogar_2438 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873623.1:443238..443588(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5H | ||
Ensembl ID: | ENSOGAG00000001990 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d [Source:HGNC Symbol;Acc:845] |
Percent Identity: | 57.98 % |
Parental protein coverage: | 73.29 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | MAGRKLALKAIDWVAFGEIIPRNQKAIANSLKSWSETLTSRLAALPENPPAIDWAYYKANVAKAGLVDDF |
.AG.KL.LKAIDWV.FGEIIP.NQKAI.NSLKSW..TLTSRL..L.EN.PAIDWA.YKANV.KA.LV.D. | |
Retrocopy | IAG*KLTLKAIDWVTFGEIIP*NQKAITNSLKSWHKTLTSRLVTLFENSPAIDWA*YKANVLKALLV-DY |
Parental | EKKLESIEGQLSEPR-WFHQREAWLGGHVKSCAEFVSLSKDRIVEYEKQ |
..K.........E.......R.A.........AEFVSLSK..I...EKQ | |
Retrocopy | SGKFNALKFPVQEDK<MYCPRDAEEKDKKTCAAEFVSLSKASIKKCEKQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |