RetrogeneDB ID: | retro_mmur_593 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | GeneScaffold_4118:344298..344773(+) | ||
Located in intron of: | ENSMICG00000006721 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5H | ||
Ensembl ID: | ENSMICG00000017484 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d [Source:HGNC Symbol;Acc:845] |
Percent Identity: | 80.86 % |
Parental protein coverage: | 99.38 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | MAGRKLALKTIDWVAFGEIIPRNQKA-IANNLKSWNETLTSRLAVLPENPPAIDWAYYKANVAKAGLVDD |
MA.RKL.LK.ID.VAFG.II..NQK..IAN.LKSWNETLT.RLA.LPENPPA.DWAYY.ANVAKAGLVDD | |
Retrocopy | MARRKLVLKAIDRVAFGKIIA*NQKT<IANSLKSWNETLTPRLATLPENPPATDWAYYRANVAKAGLVDD |
Parental | FEKKFNALKVPVPEDKYT-ALVDAEEKEDVKTCAEFVSLSKARIEEYEKELEKMRNIIPFDQMTIEDLNE |
FEK.FNALKVP.PEDKYT...VD.EE..DVKTCAE.VSLSKARIEEYEK.LEKMRNIIPFDQMT.EDLNE | |
Retrocopy | FEKLFNALKVPEPEDKYT<SQVDTEER-DVKTCAELVSLSKARIEEYEKQLEKMRNIIPFDQMTTEDLNE |
Parental | AFPETKLDKEKYPYWPHQPIEN |
AF.ETKLD.EK.P.WPHQP..N | |
Retrocopy | AFLETKLDMEK*P*WPHQPMKN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |