RetrogeneDB ID: | retro_meug_788 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold1885:42683..43136(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5H | ||
Ensembl ID: | ENSMEUG00000009346 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d [Source:HGNC Symbol;Acc:845] |
Percent Identity: | 77.63 % |
Parental protein coverage: | 94.41 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MAGRKLAMKAIDWAAFGEIIPKNQKAIANALKSHNEYLTTRLATLPEKPQVINWAYYKENVVKPGLVDEF |
M.G.K....AIDW..FGEII.KN.K.IANALKSHNEYLTTR.ATLPEKP.VINWAY.KE.V.KPGLVDEF | |
Retrocopy | MSGLKPPINAIDWTVFGEIILKNKKVIANALKSHNEYLTTRWATLPEKP*VINWAYSKEFVSKPGLVDEF |
Parental | EKKFNELKIPVPEDKFTALVDAEEQEDAKLGADFVKASNARIAELEKEMEKIKNIIPFEQMTIEDLNQAF |
EKKFNEL.IPVPEDK...LVDAEEQEDAK.GADF.K.SNARIAEL.KEMEKIKN.IPF.QMTIEDLN.AF | |
Retrocopy | EKKFNELEIPVPEDKLSVLVDAEEQEDAKSGADFMKVSNARIAELQKEMEKIKNVIPFNQMTIEDLNKAF |
Parental | PQTTLDKKKYPY |
...T...KK.PY | |
Retrocopy | SHIT-SHKKCPY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |