Parental gene:

ENSG00000189403, ENSGGOG00000026764

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:13:12304626..12307920(-)


>ENSGGOG00000026764
ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTGCAAACTTGTCGGGAGGAGCA
TAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGACCATGTCTG
CTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAGGCGGACAAGGCCCGTTATGAAAGAGAAATGAAAACCTATATTCCT
CCCAAAGGGGAGACAAAAAAGAAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCTTCGGCCTTCTTCCTCTTCTGCTC
TGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGGCCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGA
ATAACACTGCTGCAGATGACAAGCAGCCTTATGAAAAGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAA
AAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAG
GAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCTAGCGCAGTTTTTTTTTT
CTTGTCTATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 81 .28 RPM
SRP007412_cerebellum 86 .36 RPM
SRP007412_heart 25 .92 RPM
SRP007412_kidney 101 .90 RPM
SRP007412_liver 77 .37 RPM
SRP007412_testis 95 .21 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008880 possible_ortholog 7 retrogenes
Bos taurus ENSBTAG00000018103 possible_ortholog 2 retrogenes
Canis familiaris ENSCAFG00000006597 possible_ortholog 13 retrogenes
Choloepus hoffmanni ENSCHOG00000002423 possible_ortholog 16 retrogenes
Callithrix jacchus ENSCJAG00000021615 possible_ortholog 11 retrogenes
Cavia porcellus ENSCPOG00000003985 possible_ortholog 1 retrogene
Equus caballus ENSECAG00000008439 possible_ortholog 2 retrogenes
Echinops telfairi ENSETEG00000004048 possible_ortholog 18 retrogenes
Felis catus ENSFCAG00000000200 possible_ortholog 10 retrogenes
Homo sapiens ENSG00000189403 possible_ortholog 37 retrogenes
Gorilla gorilla ENSGGOG00000015882 other_paralog 1 retrogene
Gorilla gorilla ENSGGOG00000027164 other_paralog 16 retrogenes
Loxodonta africana ENSLAFG00000000269 possible_ortholog 4 retrogenes
Macropus eugenii ENSMEUG00000001380 possible_ortholog 2 retrogenes
Microcebus murinus ENSMICG00000000573 possible_ortholog 1 retrogene
Microcebus murinus ENSMICG00000007144 possible_ortholog 7 retrogenes
Myotis lucifugus ENSMLUG00000025979 possible_ortholog 17 retrogenes
Macaca mulatta ENSMMUG00000023399 ortholog_one2one 3 retrogenes
Monodelphis domestica ENSMODG00000009238 possible_ortholog 14 retrogenes
Mus musculus ENSMUSG00000066551 possible_ortholog 129 retrogenes
retro_mmus_1025, retro_mmus_1037, retro_mmus_1047, retro_mmus_1065, retro_mmus_1094, retro_mmus_1112, retro_mmus_1113, retro_mmus_1114, retro_mmus_1115, retro_mmus_1128, retro_mmus_1135, retro_mmus_1140, retro_mmus_1178, retro_mmus_1181, retro_mmus_1209, retro_mmus_1284, retro_mmus_1302, retro_mmus_1351, retro_mmus_1407, retro_mmus_1423, retro_mmus_1508, retro_mmus_1553, retro_mmus_1554, retro_mmus_1584, retro_mmus_1672, retro_mmus_1705, retro_mmus_1706, retro_mmus_1712, retro_mmus_1716, retro_mmus_1725, retro_mmus_1775, retro_mmus_1794, retro_mmus_1800, retro_mmus_1822, retro_mmus_1845, retro_mmus_1871, retro_mmus_1989, retro_mmus_2015, retro_mmus_2077, retro_mmus_2080, retro_mmus_2096, retro_mmus_2191, retro_mmus_2194, retro_mmus_2199, retro_mmus_2209, retro_mmus_2224, retro_mmus_2229, retro_mmus_2280, retro_mmus_2300, retro_mmus_2324, retro_mmus_2404, retro_mmus_2407, retro_mmus_2409, retro_mmus_2414, retro_mmus_2420, retro_mmus_2425, retro_mmus_2467, retro_mmus_2469, retro_mmus_2524, retro_mmus_2532, retro_mmus_2627, retro_mmus_2670, retro_mmus_2682, retro_mmus_2702, retro_mmus_2719, retro_mmus_2754, retro_mmus_2789, retro_mmus_2815, retro_mmus_2823, retro_mmus_2866, retro_mmus_2877, retro_mmus_2886, retro_mmus_292, retro_mmus_2923, retro_mmus_2936, retro_mmus_2940, retro_mmus_2954, retro_mmus_2965, retro_mmus_2977, retro_mmus_303, retro_mmus_3046, retro_mmus_3056, retro_mmus_3059, retro_mmus_3067, retro_mmus_3070, retro_mmus_3075, retro_mmus_3102, retro_mmus_3106, retro_mmus_3121, retro_mmus_3169, retro_mmus_3175, retro_mmus_319, retro_mmus_3190, retro_mmus_3199, retro_mmus_3207, retro_mmus_3239, retro_mmus_3289, retro_mmus_3322, retro_mmus_3353, retro_mmus_3375, retro_mmus_3476, retro_mmus_3494, retro_mmus_3533, retro_mmus_359, retro_mmus_3612, retro_mmus_3676, retro_mmus_3692, retro_mmus_3715, retro_mmus_418, retro_mmus_515, retro_mmus_530, retro_mmus_574, retro_mmus_599, retro_mmus_618, retro_mmus_623, retro_mmus_624, retro_mmus_634, retro_mmus_704, retro_mmus_705, retro_mmus_785, retro_mmus_813, retro_mmus_839, retro_mmus_855, retro_mmus_881, retro_mmus_903, retro_mmus_906, retro_mmus_930, retro_mmus_965, retro_mmus_981,
Nomascus leucogenys ENSNLEG00000000720 possible_ortholog 33 retrogenes
Oryctolagus cuniculus ENSOCUG00000021335 possible_ortholog 16 retrogenes
Otolemur garnettii ENSOGAG00000003205 possible_ortholog 104 retrogenes
retro_ogar_1008, retro_ogar_1043, retro_ogar_106, retro_ogar_1133, retro_ogar_123, retro_ogar_1232, retro_ogar_1296, retro_ogar_1299, retro_ogar_1330, retro_ogar_1386, retro_ogar_1398, retro_ogar_1399, retro_ogar_1421, retro_ogar_1423, retro_ogar_1424, retro_ogar_1431, retro_ogar_1461, retro_ogar_1560, retro_ogar_1571, retro_ogar_1585, retro_ogar_1597, retro_ogar_1600, retro_ogar_1607, retro_ogar_1628, retro_ogar_163, retro_ogar_1664, retro_ogar_1698, retro_ogar_17, retro_ogar_172, retro_ogar_1738, retro_ogar_1758, retro_ogar_1781, retro_ogar_1843, retro_ogar_1844, retro_ogar_1861, retro_ogar_1867, retro_ogar_1878, retro_ogar_1894, retro_ogar_1896, retro_ogar_198, retro_ogar_1991, retro_ogar_2136, retro_ogar_2165, retro_ogar_219, retro_ogar_2282, retro_ogar_2318, retro_ogar_2319, retro_ogar_2352, retro_ogar_2385, retro_ogar_2403, retro_ogar_2429, retro_ogar_2436, retro_ogar_2458, retro_ogar_250, retro_ogar_2559, retro_ogar_2598, retro_ogar_2615, retro_ogar_2618, retro_ogar_2730, retro_ogar_2777, retro_ogar_2778, retro_ogar_2814, retro_ogar_2824, retro_ogar_2836, retro_ogar_284, retro_ogar_2845, retro_ogar_2891, retro_ogar_2894, retro_ogar_2906, retro_ogar_2961, retro_ogar_3008, retro_ogar_3018, retro_ogar_3028, retro_ogar_304, retro_ogar_311, retro_ogar_3136, retro_ogar_317, retro_ogar_320, retro_ogar_3208, retro_ogar_3230, retro_ogar_3325, retro_ogar_3330, retro_ogar_3355, retro_ogar_3374, retro_ogar_3500, retro_ogar_422, retro_ogar_435, retro_ogar_511, retro_ogar_542, retro_ogar_547, retro_ogar_634, retro_ogar_663, retro_ogar_698, retro_ogar_716, retro_ogar_772, retro_ogar_778, retro_ogar_8, retro_ogar_835, retro_ogar_890, retro_ogar_904, retro_ogar_912, retro_ogar_918, retro_ogar_92, retro_ogar_933,
Otolemur garnettii ENSOGAG00000032147 possible_ortholog 1 retrogene
Ochotona princeps ENSOPRG00000003507 possible_ortholog 8 retrogenes
Procavia capensis ENSPCAG00000002201 possible_ortholog 2 retrogenes
Pongo abelii ENSPPYG00000005546 possible_ortholog 35 retrogenes
Pteropus vampyrus ENSPVAG00000001431 possible_ortholog 6 retrogenes
Rattus norvegicus ENSRNOG00000029813 possible_ortholog 1 retrogene
Sorex araneus ENSSARG00000004470 ortholog_one2many 14 retrogenes
Sarcophilus harrisii ENSSHAG00000014034 possible_ortholog 2 retrogenes
Sus scrofa ENSSSCG00000009327 possible_ortholog 3 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000000443 possible_ortholog 19 retrogenes
Tarsius syrichta ENSTSYG00000006328 possible_ortholog 7 retrogenes
Tursiops truncatus ENSTTRG00000010327 possible_ortholog 8 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_213 91.35 99.46
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2. retro_ggor_259 69.11 100.00
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3. retro_ggor_388 78.42 74.19
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4. retro_ggor_448 88.33 95.70
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5. retro_ggor_483 82.02 95.16
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6. retro_ggor_753 63.31 73.12
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7. retro_ggor_964 51.92 79.57
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8. retro_ggor_1057 74.59 95.70
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9. retro_ggor_1212 70.86 92.47
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10. retro_ggor_1421 64.80 95.16
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11. retro_ggor_1596 93.97 61.83
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12. retro_ggor_1637 82.78 95.16
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13. retro_ggor_1662 70.00 68.82
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14. retro_ggor_1735 75.14 96.77
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15. retro_ggor_1777 88.83 95.70
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16. retro_ggor_1856 68.67 90.74
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17. retro_ggor_1951 71.03 55.91
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18. retro_ggor_1977 70.93 90.86
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19. retro_ggor_2422 83.72 91.40
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20. retro_ggor_2441 84.51 75.27
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21. retro_ggor_2478 72.99 91.94
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22. retro_ggor_2897 81.71 93.55
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23. retro_ggor_3013 77.19 91.94
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Download FASTA sequences of all ENSGGOG00000026764 retrocopies