RetrogeneDB ID: | retro_nleu_448 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397265.1:36858696..36859380(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSNLEG00000019150 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPE | ||
Ensembl ID: | ENSNLEG00000007172 | ||
Aliases: | None | ||
Description: | Ribulose-phosphate 3-epimerase [Source:UniProtKB/TrEMBL;Acc:G1R6C4] |
Percent Identity: | 94.74 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMH |
M.SGCKIGPSILNSDLANLGAE.L.MLDSGADYLHLDVMDGHF.PNITFGHPVVESLRKQLGQDPFFDMH | |
Retrocopy | MVSGCKIGPSILNSDLANLGAEYLQMLDSGADYLHLDVMDGHFDPNITFGHPVVESLRKQLGQDPFFDMH |
Parental | MMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALV |
MMVSKPEQWVKPM..AGANQYTFHLEATEN.G.LIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALV | |
Retrocopy | MMVSKPEQWVKPMVIAGANQYTFHLEATENLGTLIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALV |
Parental | MTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVI |
MTVEPGFG.QKFMEDMM.KVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAG.NMIVSGSAIMRSEDPRSVI | |
Retrocopy | MTVEPGFGRQKFMEDMMRKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGVNMIVSGSAIMRSEDPRSVI |
Parental | NLLRNVCSEAAQKRSLDR |
NLLRNVCSEAAQK.SLDR | |
Retrocopy | NLLRNVCSEAAQKCSLDR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |