RetrogeneDB ID: | retro_tsyr_546 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_137680:7196..7483(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPE | ||
Ensembl ID: | ENSTSYG00000003304 | ||
Aliases: | None | ||
Description: | ribulose-5-phosphate-3-epimerase [Source:HGNC Symbol;Acc:10293] |
Percent Identity: | 85.57 % |
Parental protein coverage: | 51.34 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | NQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMR |
...DMALVMTVE.GFGG.KFMEDMMPKVHWLRTQF.SLDIEV.GGVGPDTVHKCAEAGANMIVSGSAI.. | |
Retrocopy | HRVDMALVMTVESGFGGHKFMEDMMPKVHWLRTQFLSLDIEVEGGVGPDTVHKCAEAGANMIVSGSAIIN |
Parental | SEDPRSVINLLRN-VCSEAAQKRSLDR |
SEDPRSVINL.RN..CSEAAQK.SLD. | |
Retrocopy | SEDPRSVINLSRN<FCSEAAQKHSLDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |