RetrogeneDB ID: | retro_tsyr_1663 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_53404:2923..3478(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPE | ||
Ensembl ID: | ENSTSYG00000003304 | ||
Aliases: | None | ||
Description: | ribulose-5-phosphate-3-epimerase [Source:HGNC Symbol;Acc:10293] |
Percent Identity: | 89.25 % |
Parental protein coverage: | 99.47 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | HFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIREN |
HFVPNITFGHPVVESLRK.LGQDPFFDMHM.V.RPEQWVKPMA.AGANQYTFHL.ATENP.ALIKDI.EN | |
Retrocopy | HFVPNITFGHPVVESLRK*LGQDPFFDMHMTVFRPEQWVKPMAIAGANQYTFHLKATENPEALIKDIWEN |
Parental | GMKVGLAIKPGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPD |
GMKVGLAIKPGTTVEYLAPWANQIDMAL.MTVE.GFG.QKF..DMMPK.HWLRTQFPSLDIEV.GG.G.D | |
Retrocopy | GMKVGLAIKPGTTVEYLAPWANQIDMALGMTVELGFGRQKFVKDMMPKFHWLRTQFPSLDIEVNGGIGSD |
Parental | TVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQKRSLD |
TVHKCAEAG.N.IVSGS.IM.SEDPRSVINLLRNVCSEAAQKRSLD | |
Retrocopy | TVHKCAEAGTNVIVSGSVIM-SEDPRSVINLLRNVCSEAAQKRSLD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |