RetrogeneDB ID: | retro_tsyr_113 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | GeneScaffold_3113:52247..52795(+) | ||
Located in intron of: | ENSTSYG00000005648 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPE | ||
Ensembl ID: | ENSTSYG00000003304 | ||
Aliases: | None | ||
Description: | ribulose-5-phosphate-3-epimerase [Source:HGNC Symbol;Acc:10293] |
Percent Identity: | 75.53 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | HFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSRPEQW-VKPMAVAGANQYTFHLEATENPGALIKDIRE |
HFVP..TFGHPV.E.L.KQLG.....D..M.VSR.E.W.VKPMA..G.NQYTF.LEA.EN.GALIK.I.E | |
Retrocopy | HFVPITTFGHPVAETLQKQLGKASSSDTLMRVSRLE*W<VKPMAGGGDNQYTFRLEAAENQGALIKNI*E |
Parental | NGMKVGLAIKPGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGP |
NGMK.GL.IK.....EYLA.WANQI.MALVMTVE..FGGQKFM.DMMPKVH.LRTQFPSLDIEVDGG.GP | |
Retrocopy | NGMKAGLVIK----LEYLAAWANQINMALVMTVETRFGGQKFMDDMMPKVHGLRTQFPSLDIEVDGGIGP |
Parental | DTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQKRSLDR |
D.VHKCAEA.A.MIVS.SAIM.SEDPRSVINLL.NVCSEAAQK..LDR | |
Retrocopy | DSVHKCAEARAKMIVSDSAIMKSEDPRSVINLLINVCSEAAQKHFLDR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |