Parental gene:

BT.87494, ENSBTAG00000011184

Aliases:None
Description:Ferritin heavy chain [Source:UniProtKB/Swiss-Prot;Acc:O46414]
Organism:Cow (Bos taurus)
Coordinates:29:41172508..41175112(-)


>ENSBTAG00000011184
ATGACGACCGCATCCCCCTCGCAGGTGCGCCAGAACTACCACCAGGACTCGGAGGCCGCCATCAACCGCCAGATCAACCT
GGAGCTCTACGCCTCCTATGTCTACCTGTCCATGTCGTACTATTTTGACCGTGATGATGTGGCTTTGAAGAACTTTGCCA
AATACTTTCTTCACCAATCTCATGAGGAGAGGGAACATGCTGAGAGACTGATGAAGCTGCAGAACCAGCGAGGCGGCCGA
ATCTTCCTTCAGGATATCAAGAAACCAGACCGTGATGACTGGGAGAATGGGCTGACTGCAATGGAATGTGCGCTGTGCTT
GGAGAGAAGTGTGAATCAGTCACTACTGGAACTGCACAAACTGGCCACTGAAAATGATCCCCATCTGTGTGATTTCATTG
AGACTCATTACCTGAATGAGCAGGTGGAAGCCATCAAAGAATTGGGTGACCACATAACCAACCTGCGCAAGATGGGGGCT
CCTGGATCTGGCATGGCAGAGTACCTCTTTGACAAGCACACCCTGGGACACAGTGAGAGCTAA

Library Parental gene expression (RPM)
SRP017611_brain 1335 .71 RPM
SRP017611_kidney 719 .44 RPM
SRP017611_liver 1381 .28 RPM
ERP005899_muscle 957 .01 RPM
ERP005899_liver 1205 .08 RPM
SRP030211_testis 325 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016831 possible_ortholog 1 retrogene
retro_amel_115,
Bos taurus ENSBTAG00000013343 other_paralog 33 retrogenes
retro_btau_1007, retro_btau_1011, retro_btau_1033, retro_btau_1197, retro_btau_1209, retro_btau_1277, retro_btau_1354, retro_btau_1396, retro_btau_1452, retro_btau_1464, retro_btau_1466, retro_btau_1481, retro_btau_1511, retro_btau_1540, retro_btau_1561, retro_btau_1683, retro_btau_1781, retro_btau_1798, retro_btau_1848, retro_btau_250, retro_btau_301, retro_btau_339, retro_btau_340, retro_btau_419, retro_btau_422, retro_btau_520, retro_btau_597, retro_btau_639, retro_btau_649, retro_btau_938, retro_btau_963, retro_btau_993, retro_btau_998,
Canis familiaris ENSCAFG00000015901 possible_ortholog 1 retrogene
retro_cfam_150,
Callithrix jacchus ENSCJAG00000019089 possible_ortholog 16 retrogenes
retro_cjac_1570, retro_cjac_1634, retro_cjac_2115, retro_cjac_2233, retro_cjac_230, retro_cjac_232, retro_cjac_2320, retro_cjac_2531, retro_cjac_278, retro_cjac_2843, retro_cjac_2857, retro_cjac_485, retro_cjac_519, retro_cjac_699, retro_cjac_767, retro_cjac_804,
Cavia porcellus ENSCPOG00000026586 ortholog_one2one 3 retrogenes
retro_cpor_1309, retro_cpor_15, retro_cpor_157,
Dasypus novemcinctus ENSDNOG00000017128 possible_ortholog 83 retrogenes
retro_dnov_1017, retro_dnov_1074, retro_dnov_1078, retro_dnov_110, retro_dnov_1179, retro_dnov_1188, retro_dnov_1196, retro_dnov_1201, retro_dnov_1205, retro_dnov_1271, retro_dnov_1352, retro_dnov_1356, retro_dnov_1369, retro_dnov_1397, retro_dnov_1415, retro_dnov_1425, retro_dnov_1446, retro_dnov_1489, retro_dnov_1526, retro_dnov_1535, retro_dnov_1554, retro_dnov_1565, retro_dnov_162, retro_dnov_1627, retro_dnov_1640, retro_dnov_1777, retro_dnov_1787, retro_dnov_1792, retro_dnov_1827, retro_dnov_1851, retro_dnov_1865, retro_dnov_1875, retro_dnov_189, retro_dnov_197, retro_dnov_2005, retro_dnov_2065, retro_dnov_2093, retro_dnov_2097, retro_dnov_2109, retro_dnov_2124, retro_dnov_2136, retro_dnov_2154, retro_dnov_2173, retro_dnov_220, retro_dnov_2216, retro_dnov_2231, retro_dnov_2241, retro_dnov_2251, retro_dnov_2356, retro_dnov_2388, retro_dnov_2399, retro_dnov_242, retro_dnov_2443, retro_dnov_2444, retro_dnov_2454, retro_dnov_2476, retro_dnov_2483, retro_dnov_2489, retro_dnov_2511, retro_dnov_2528, retro_dnov_2554, retro_dnov_2579, retro_dnov_2607, retro_dnov_2626, retro_dnov_2646, retro_dnov_304, retro_dnov_383, retro_dnov_409, retro_dnov_422, retro_dnov_471, retro_dnov_517, retro_dnov_52, retro_dnov_55, retro_dnov_589, retro_dnov_61, retro_dnov_661, retro_dnov_675, retro_dnov_722, retro_dnov_726, retro_dnov_810, retro_dnov_864, retro_dnov_890, retro_dnov_994,
Felis catus ENSFCAG00000007382 possible_ortholog 1 retrogene
retro_fcat_887,
Gorilla gorilla ENSGGOG00000027722 possible_ortholog 7 retrogenes
retro_ggor_1313, retro_ggor_153, retro_ggor_1671, retro_ggor_1858, retro_ggor_2835, retro_ggor_64, retro_ggor_726,
Latimeria chalumnae ENSLACG00000017426 ortholog_one2many 1 retrogene
retro_lcha_75,
Loxodonta africana ENSLAFG00000004824 possible_ortholog 12 retrogenes
retro_lafr_106, retro_lafr_1080, retro_lafr_1129, retro_lafr_138, retro_lafr_321, retro_lafr_433, retro_lafr_523, retro_lafr_53, retro_lafr_624, retro_lafr_717, retro_lafr_760, retro_lafr_966,
Myotis lucifugus ENSMLUG00000025726 possible_ortholog 16 retrogenes
retro_mluc_1030, retro_mluc_1142, retro_mluc_1211, retro_mluc_1354, retro_mluc_1464, retro_mluc_1769, retro_mluc_1984, retro_mluc_2002, retro_mluc_2091, retro_mluc_212, retro_mluc_2635, retro_mluc_361, retro_mluc_532, retro_mluc_556, retro_mluc_850, retro_mluc_885,
Monodelphis domestica ENSMODG00000007582 possible_ortholog 9 retrogenes
retro_mdom_1134, retro_mdom_122, retro_mdom_1294, retro_mdom_1407, retro_mdom_1742, retro_mdom_300, retro_mdom_564, retro_mdom_643, retro_mdom_809,
Oryctolagus cuniculus ENSOCUG00000014108 possible_ortholog 4 retrogenes
retro_ocun_1172, retro_ocun_1179, retro_ocun_1598, retro_ocun_93,
Ochotona princeps ENSOPRG00000010734 ortholog_one2one 7 retrogenes
retro_opri_1219, retro_opri_292, retro_opri_558, retro_opri_689, retro_opri_816, retro_opri_818, retro_opri_936,
Pongo abelii ENSPPYG00000003173 possible_ortholog 12 retrogenes
retro_pabe_1034, retro_pabe_1186, retro_pabe_2410, retro_pabe_2483, retro_pabe_2484, retro_pabe_249, retro_pabe_3351, retro_pabe_3406, retro_pabe_35, retro_pabe_3713, retro_pabe_47, retro_pabe_479,
Sus scrofa ENSSSCG00000014540 ortholog_one2many 9 retrogenes
retro_sscr_1045, retro_sscr_168, retro_sscr_286, retro_sscr_359, retro_sscr_498, retro_sscr_581, retro_sscr_78, retro_sscr_906, retro_sscr_949,
Ictidomys tridecemlineatus ENSSTOG00000014521 possible_ortholog 1 retrogene
retro_itri_250,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_121 76.84 97.78
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2. retro_btau_256 82.95 70.56
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3. retro_btau_595 96.69 100.00
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4. retro_btau_673 86.26 100.00
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5. retro_btau_959 59.85 75.00
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6. retro_btau_1151 80.56 98.33
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7. retro_btau_1255 71.43 80.00
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8. retro_btau_1473 92.82 100.00
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9. retro_btau_1708 55.31 96.67
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10. retro_btau_1745 95.58 100.00
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Download FASTA sequences of all ENSBTAG00000011184 retrocopies