Parental gene:

Rpl26, ENSMUSG00000060938

Aliases:Rpl26, SIG-20
Description:ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
Organism:Mouse (Mus musculus)
Coordinates:11:68901582..68906989(+)


>ENSMUSG00000060938
ATGAAGTTCAATCCCTTCGTGACTTCTGACCGAAGCAAGAACCGCAAACGGCATTTCAATGCGCCCTCTCACATTCGGAG
GAAGATCATGTCTTCCCCTCTTTCCAAAGAGCTGAGACAGAAGTATAACGTTCGGTCTATGCCCATTCGGAAGGATGACG
AAGTTCAGGTTGTTCGCGGACACTACAAAGGCCAGCAGATTGGCAAGGTGGTCCAAGTGTACAGGAAGAAGTACGTCATC
TACATCGAACGAGTCCAGCGAGAGAAGGCTAATGGCACAACCGTCCATGTGGGCATCCACCCCAGCAAGGTCGTTATCAC
CAGGCTAAAGCTGGACAAGGACCGCAAGAAGATCCTGGAGAGGAAAGCCAAGTCCCGACAAGTAGGAAAGGAGAAGGGCA
AATACAAGGAAGAAACGATCGAGAAGATGCAGGAGTAG

Library Parental gene expression (RPM)
SRP007412_brain 82 .07 RPM
SRP007412_cerebellum 43 .77 RPM
SRP007412_heart 61 .58 RPM
SRP007412_kidney 56 .40 RPM
SRP007412_liver 60 .43 RPM
SRP007412_testis 61 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000002453 possible_ortholog 7 retrogenes
retro_amel_1175, retro_amel_1535, retro_amel_1885, retro_amel_1934, retro_amel_360, retro_amel_499, retro_amel_900,
Bos taurus ENSBTAG00000012344 ortholog_one2one 2 retrogenes
retro_btau_1090, retro_btau_230,
Callithrix jacchus ENSCJAG00000014372 possible_ortholog 8 retrogenes
retro_cjac_110, retro_cjac_119, retro_cjac_240, retro_cjac_250, retro_cjac_270, retro_cjac_297, retro_cjac_321, retro_cjac_362,
Gorilla gorilla ENSGGOG00000023944 possible_ortholog 4 retrogenes
retro_ggor_2565, retro_ggor_270, retro_ggor_51, retro_ggor_974,
Myotis lucifugus ENSMLUG00000002176 possible_ortholog 1 retrogene
retro_mluc_232,
Macaca mulatta ENSMMUG00000003448 possible_ortholog 22 retrogenes
retro_mmul_1117, retro_mmul_1361, retro_mmul_1398, retro_mmul_1497, retro_mmul_1710, retro_mmul_1773, retro_mmul_1899, retro_mmul_1986, retro_mmul_2052, retro_mmul_2163, retro_mmul_2332, retro_mmul_2344, retro_mmul_325, retro_mmul_360, retro_mmul_398, retro_mmul_405, retro_mmul_448, retro_mmul_548, retro_mmul_805, retro_mmul_903, retro_mmul_920, retro_mmul_992,
Monodelphis domestica ENSMODG00000006201 possible_ortholog 2 retrogenes
retro_mdom_36, retro_mdom_64,
Nomascus leucogenys ENSNLEG00000009981 possible_ortholog 1 retrogene
retro_nleu_76,
Oryctolagus cuniculus ENSOCUG00000006538 ortholog_one2one 11 retrogenes
retro_ocun_1125, retro_ocun_1290, retro_ocun_1442, retro_ocun_1484, retro_ocun_1515, retro_ocun_1621, retro_ocun_1917, retro_ocun_529, retro_ocun_542, retro_ocun_589, retro_ocun_803,
Pan troglodytes ENSPTRG00000008742 possible_ortholog 3 retrogenes
retro_ptro_1546, retro_ptro_2510, retro_ptro_73,
Rattus norvegicus ENSRNOG00000004214 possible_ortholog 3 retrogenes
retro_rnor_213, retro_rnor_260, retro_rnor_273,
Sarcophilus harrisii ENSSHAG00000006890 possible_ortholog 1 retrogene
retro_shar_458,
Sus scrofa ENSSSCG00000028850 possible_ortholog 9 retrogenes
retro_sscr_261, retro_sscr_363, retro_sscr_426, retro_sscr_427, retro_sscr_471, retro_sscr_485, retro_sscr_508, retro_sscr_609, retro_sscr_736,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_320 58.06 63.45
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_mmus_384 54.17 97.24
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_mmus_556 65.19 90.34
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_mmus_900 75.51 100.00
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_mmus_939 91.72 100.00
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_mmus_1325 52.34 72.73
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_mmus_1444 91.72 100.00
Please wait, loading
Please wait, loading
Please wait, loading
8. retro_mmus_1506 94.48 100.00
Please wait, loading
Please wait, loading
Please wait, loading
9. retro_mmus_1642 81.51 100.00
Please wait, loading
Please wait, loading
Please wait, loading
10. retro_mmus_1866 98.62 100.00
Please wait, loading
Please wait, loading
Please wait, loading
11. retro_mmus_1978 86.30 100.00
Please wait, loading
Please wait, loading
Please wait, loading
12. retro_mmus_2011 95.21 100.00
Please wait, loading
Please wait, loading
Please wait, loading
13. retro_mmus_2218 76.69 91.72
Please wait, loading
Please wait, loading
Please wait, loading
14. retro_mmus_2435 98.63 100.00
Please wait, loading
Please wait, loading
Please wait, loading
15. retro_mmus_2540 100.00 100.00
Please wait, loading
Please wait, loading
Please wait, loading
16. retro_mmus_2673 89.04 100.00
Please wait, loading
Please wait, loading
Please wait, loading
17. retro_mmus_3078 91.16 100.00
Please wait, loading
Please wait, loading
Please wait, loading
18. retro_mmus_3174 86.81 97.93
Please wait, loading
Please wait, loading
Please wait, loading
19. retro_mmus_3270 87.05 95.17
Please wait, loading
Please wait, loading
Please wait, loading
20. retro_mmus_3291 84.96 91.03
Please wait, loading
Please wait, loading
Please wait, loading
21. retro_mmus_3361 78.05 56.55
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMUSG00000060938 retrocopies