Parental gene:

ENSMODG00000006201

Aliases:None
Description:None
Organism:Opossum (Monodelphis domestica)
Coordinates:1:372858682..372862895(+)


>ENSMODG00000006201
ATGAAGTTCAATCCTTTCGTGACCTCGGACCGAAGCAAAAACCGCAAGAGACACTTCAATGCGCCCTCGCATATCCGCCG
CAAGATCATGTCCTCTCCGCTCTCGAAAGAACTTAGGCAGAAATACAACGTTCGCTCCATGCCCATCCGAAAGGATGACG
AGGTCCAGGTGGTTCGTGGACACTACAAAGGTCAGCAAATTGGCAAGGTAGTCCAGGTTTACAGAAAGAAATATGTCATC
TATATTGAGCGTGTTCAGCGTGAAAAAGCTAATGGCACAACTGTCCATGTGGGCATTCACCCTAGCAAGGTAGTTATCAC
CAGGCTAAAACTGGACAAAGATCGCAAAAAGATTCTTGAGCGAAAAGCCAAATCTCGACAAGTTGGAAAGGAGAAGGGCA
AATATAAAGAAGAAACTATTGAGAAGATGCAAGAATAA

Library Parental gene expression (RPM)
SRP007412_brain 125 .87 RPM
SRP007412_cerebellum 110 .99 RPM
SRP007412_heart 161 .87 RPM
SRP007412_kidney 194 .89 RPM
SRP007412_liver 227 .07 RPM
SRP007412_testis 64 .04 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000002453 possible_ortholog 7 retrogenes
Bos taurus ENSBTAG00000012344 possible_ortholog 2 retrogenes
Choloepus hoffmanni ENSCHOG00000004703 possible_ortholog 10 retrogenes
Callithrix jacchus ENSCJAG00000014372 possible_ortholog 8 retrogenes
Cavia porcellus ENSCPOG00000001315 possible_ortholog 10 retrogenes
Dasypus novemcinctus ENSDNOG00000002470 possible_ortholog 3 retrogenes
Equus caballus ENSECAG00000015757 ortholog_one2one 4 retrogenes
Felis catus ENSFCAG00000011259 possible_ortholog 13 retrogenes
Homo sapiens ENSG00000161970 possible_ortholog 27 retrogenes
Gorilla gorilla ENSGGOG00000023944 possible_ortholog 4 retrogenes
Macropus eugenii ENSMEUG00000009891 possible_ortholog 7 retrogenes
Myotis lucifugus ENSMLUG00000002176 possible_ortholog 1 retrogene
Macaca mulatta ENSMMUG00000003448 possible_ortholog 22 retrogenes
Mustela putorius furo ENSMPUG00000007988 ortholog_one2one 12 retrogenes
Mus musculus ENSMUSG00000060938 possible_ortholog 21 retrogenes
Nomascus leucogenys ENSNLEG00000009981 ortholog_one2one 1 retrogene
Oryctolagus cuniculus ENSOCUG00000006538 possible_ortholog 11 retrogenes
Otolemur garnettii ENSOGAG00000017070 possible_ortholog 3 retrogenes
Pan troglodytes ENSPTRG00000008742 possible_ortholog 3 retrogenes
Rattus norvegicus ENSRNOG00000004214 possible_ortholog 3 retrogenes
Sorex araneus ENSSARG00000005798 possible_ortholog 13 retrogenes
Sarcophilus harrisii ENSSHAG00000006890 ortholog_one2one 1 retrogene
Sus scrofa ENSSSCG00000028850 ortholog_one2one 9 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000021923 possible_ortholog 6 retrogenes
Tupaia belangeri ENSTBEG00000007749 possible_ortholog 53 retrogenes
Tarsius syrichta ENSTSYG00000001483 possible_ortholog 17 retrogenes
Vicugna pacos ENSVPAG00000000279 possible_ortholog 4 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_36 88.97 100.00
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2. retro_mdom_64 96.55 100.00
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Download FASTA sequences of all ENSMODG00000006201 retrocopies