Parental gene:

RPL37, ENSPPYG00000015422

Aliases:None
Description:ribosomal protein L37 [Source:HGNC Symbol;Acc:10347]
Organism:Orangutan (Pongo abelii)
Coordinates:5:41843677..41849306(-)


>ENSPPYG00000015422
ATGACGAAGGGAACGTCATCGTTTGGAAAGCGTCGCAATAAGACGCACACGTTGTGCCGCCGCTGTGGCTCTAAGGCCTA
CCACCTTCAGAAGTCGACCTGTGGCAAATGTGGCTACCCTGCCAAGCGCAAGAGAAAGTATAACTGGAGTGCCAAGGCTA
AAAGACGAAATACCACCGGAACTGGTCGAATGAGGCACCTAAAAATTGTATACCGCAGATTCAGGCATGGATTCCGTGAA
GGAACAACACCTAAACCCAAGAGGGCAGCTGTTGCAGCATCCAGTTCATCTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 62 .42 RPM
SRP007412_cerebellum 60 .68 RPM
SRP007412_heart 63 .73 RPM
SRP007412_kidney 73 .02 RPM
SRP007412_liver 81 .68 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000145592 ortholog_one2one 21 retrogenes
retro_hsap_1277, retro_hsap_1424, retro_hsap_156, retro_hsap_1747, retro_hsap_1763, retro_hsap_2009, retro_hsap_2120, retro_hsap_2239, retro_hsap_2265, retro_hsap_2499, retro_hsap_2515, retro_hsap_2923, retro_hsap_343, retro_hsap_3610, retro_hsap_3901, retro_hsap_3958, retro_hsap_4685, retro_hsap_537, retro_hsap_795, retro_hsap_887, retro_hsap_953,
Latimeria chalumnae ENSLACG00000002787 possible_ortholog 1 retrogene
retro_lcha_6,
Loxodonta africana ENSLAFG00000030052 ortholog_one2one 13 retrogenes
retro_lafr_1101, retro_lafr_1123, retro_lafr_1125, retro_lafr_1136, retro_lafr_215, retro_lafr_374, retro_lafr_448, retro_lafr_507, retro_lafr_532, retro_lafr_619, retro_lafr_775, retro_lafr_985, retro_lafr_986,
Myotis lucifugus ENSMLUG00000001565 ortholog_one2one 10 retrogenes
retro_mluc_1037, retro_mluc_1334, retro_mluc_1441, retro_mluc_1651, retro_mluc_1897, retro_mluc_1917, retro_mluc_2006, retro_mluc_454, retro_mluc_738, retro_mluc_959,
Macaca mulatta ENSMMUG00000023807 possible_ortholog 6 retrogenes
retro_mmul_1602, retro_mmul_1672, retro_mmul_206, retro_mmul_329, retro_mmul_976, retro_mmul_997,
Monodelphis domestica ENSMODG00000020301 possible_ortholog 3 retrogenes
retro_mdom_130, retro_mdom_1843, retro_mdom_942,
Nomascus leucogenys ENSNLEG00000016508 ortholog_one2one 4 retrogenes
retro_nleu_1841, retro_nleu_2065, retro_nleu_2407, retro_nleu_77,
Otolemur garnettii ENSOGAG00000034300 ortholog_one2one 7 retrogenes
retro_ogar_127, retro_ogar_1308, retro_ogar_1662, retro_ogar_1667, retro_ogar_2670, retro_ogar_662, retro_ogar_76,
Pan troglodytes ENSPTRG00000016822 ortholog_one2one 20 retrogenes
retro_ptro_1208, retro_ptro_1219, retro_ptro_1338, retro_ptro_1451, retro_ptro_1460, retro_ptro_152, retro_ptro_1552, retro_ptro_1584, retro_ptro_1605, retro_ptro_1978, retro_ptro_2440, retro_ptro_2654, retro_ptro_2687, retro_ptro_273, retro_ptro_403, retro_ptro_553, retro_ptro_613, retro_ptro_660, retro_ptro_873, retro_ptro_974,
Rattus norvegicus ENSRNOG00000012538 possible_ortholog 6 retrogenes
retro_rnor_171, retro_rnor_181, retro_rnor_220, retro_rnor_246, retro_rnor_321, retro_rnor_325,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_212 84.54 100.00
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2. retro_pabe_353 75.56 92.78
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3. retro_pabe_466 77.32 98.97
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4. retro_pabe_634 100.00 100.00
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5. retro_pabe_707 57.14 98.97
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6. retro_pabe_813 67.01 100.00
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7. retro_pabe_1058 52.11 70.10
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8. retro_pabe_1180 76.29 100.00
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9. retro_pabe_1443 80.82 75.26
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10. retro_pabe_1532 86.36 68.04
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11. retro_pabe_1643 83.00 100.00
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12. retro_pabe_1705 57.65 85.57
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13. retro_pabe_1756 54.55 77.32
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14. retro_pabe_1840 71.95 82.47
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15. retro_pabe_1851 73.47 100.00
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16. retro_pabe_1865 73.17 82.47
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17. retro_pabe_1951 69.70 100.00
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18. retro_pabe_1967 86.42 83.51
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19. retro_pabe_1985 62.24 100.00
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20. retro_pabe_2403 56.47 85.57
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21. retro_pabe_2432 72.16 100.00
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22. retro_pabe_2962 73.96 97.94
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23. retro_pabe_3180 74.75 100.00
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24. retro_pabe_3260 89.47 97.94
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25. retro_pabe_3549 54.12 85.57
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26. retro_pabe_3638 69.79 98.97
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Download FASTA sequences of all ENSPPYG00000015422 retrocopies