RetrogeneDB ID: | retro_chof_1715 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_36527:6667..6925(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | POMP | ||
Ensembl ID: | ENSCHOG00000012807 | ||
Aliases: | None | ||
Description: | proteasome maturation protein [Source:HGNC Symbol;Acc:20330] |
Percent Identity: | 90.7 % |
Parental protein coverage: | 61.43 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | ARGLGSQLKDSIPVTELSASGPFESQDLLRRGFPCVKNELLPSHPLELSEKNFQLNQDKMNFSTLRNIQG |
ARGLGS.LKD.IPVTE.S.SGPF.SQDLLR.GFPCVKNELLPSHPLEL.EKNFQLNQDK.NFSTLRNIQG | |
Retrocopy | ARGLGSELKDRIPVTEFSTSGPFASQDLLRKGFPCVKNELLPSHPLELLEKNFQLNQDKINFSTLRNIQG |
Parental | LFAPLKLQMEFKAVQQ |
LFAPLKLQMEFKAVQQ | |
Retrocopy | LFAPLKLQMEFKAVQQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |