RetrogeneDB ID: | retro_etel_718 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_154541:316..606(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | POMP | ||
Ensembl ID: | ENSETEG00000012448 | ||
Aliases: | None | ||
Description: | proteasome maturation protein [Source:HGNC Symbol;Acc:20330] |
Percent Identity: | 61.62 % |
Parental protein coverage: | 83.05 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | NARGLGSQLKDSIPVTELSASGPFESHDLLRKGFSCV-KNELLPSHPLELSEKNFQLNQDKMNFSTLRNI |
NARGLG.Q.K.S...T.LSASGPF.S..LL..GF.C..KNELLPS.P...SEK.F...QDK...ST.RNI | |
Retrocopy | NARGLGTQRKGSTLLTDLSASGPFDSQNLLQGGFVCE<KNELLPSLPFQVSEKKFPAAQDKVT-STPRNI |
Parental | QGLFAPLKLQMEFKAVQQVQRLPFLPSSN |
.G...PLKLQME.KAVQ.VQ.LP.L...N | |
Retrocopy | LGPSVPLKLQMELKAVQWVQGLPLLHCAN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |