RetrogeneDB ID: | retro_chof_658 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_132256:4004..4266(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | POMP | ||
Ensembl ID: | ENSCHOG00000012807 | ||
Aliases: | None | ||
Description: | proteasome maturation protein [Source:HGNC Symbol;Acc:20330] |
Percent Identity: | 89.77 % |
Parental protein coverage: | 62.14 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | NARGLGSQLKDSIPVTELSASGPFESQDLLRRGFPCVKNELLPSHPLELSEKNFQLNQDKMNFSTLRNIQ |
NARGLGSQLKDSIPVTELSA.GPFESQDLL..GFPCVK.E.LPSHP.ELSEKNFQLNQDKMNFSTL.NIQ | |
Retrocopy | NARGLGSQLKDSIPVTELSANGPFESQDLLWKGFPCVKSEVLPSHPHELSEKNFQLNQDKMNFSTLSNIQ |
Parental | GLFAPLKL-QMEFKAVQQ |
GLFAPLK..QMEFKAVQQ | |
Retrocopy | GLFAPLKV>QMEFKAVQQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |