RetrogeneDB ID: | retro_tsyr_1002 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_272495:2633..2978(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | POMP | ||
Ensembl ID: | ENSTSYG00000005121 | ||
Aliases: | None | ||
Description: | proteasome maturation protein [Source:HGNC Symbol;Acc:20330] |
Percent Identity: | 76.72 % |
Parental protein coverage: | 82.27 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MNSRGLGSQLRDSIPVTELSASGPFESHDLLRKGFSCVKNELLPSHPLELSEKNFQLNQDKMNFSTLRNI |
MN.RGL.SQL.DS.P.T.LSAS.PFESH.LL.KGFSCVKNELLPSHPLELSEK.......KMN.STLRNI | |
Retrocopy | MNARGLRSQLKDSTPITKLSASEPFESHALLQKGFSCVKNELLPSHPLELSEK-VSNSTNKMNSSTLRNI |
Parental | QGLFAPLKLQMEFKAVQQVQRLPFLSSSNLSLDILKGNDETIGFED |
Q.LFAPLKLQ.EFKAVQQVQ.L.FLS.S.L.LDIL.GNDETI.F.D | |
Retrocopy | QDLFAPLKLQKEFKAVQQVQSLSFLSNSKLLLDILRGNDETIRFGD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |