RetrogeneDB ID: | retro_tbel_2264 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_107978:10608..10896(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | POMP | ||
Ensembl ID: | ENSTBEG00000012149 | ||
Aliases: | None | ||
Description: | proteasome maturation protein [Source:HGNC Symbol;Acc:20330] |
Percent Identity: | 56.25 % |
Parental protein coverage: | 61.94 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | LPSHPLELSEKNFQLNQDKMNFSTLRTSQGLFAPLKLQMEFKAVQQVQRLPFLSSSNLSLDILRGNDETI |
LP..PLE.SEK..QL.QDKM.F....TS.GLF.PL..QM..KA...V..L....SS.LSL.I.RG...T. | |
Retrocopy | LPPCPLEVSEKISQLHQDKMDFPHWKTSGGLFFPLTSQMRSKAGW*VKHLLMVFSSDLSLGISRGPSKTL |
Parental | GFEDILNDPSQSELMGEPHVMVEYKL |
G..DIL.DPSQSE..GEPH...E.KL | |
Retrocopy | GPGDILSDPSQSERRGEPHWTMERKL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |