RetrogeneDB ID: | retro_mputfur_1447 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897139.1:2277313..2277727(+) | ||
Located in intron of: | ENSMPUG00000004438 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | POMP | ||
Ensembl ID: | ENSMPUG00000004690 | ||
Aliases: | None | ||
Description: | proteasome maturation protein [Source:HGNC Symbol;Acc:20330] |
Percent Identity: | 70.83 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | MNARGLGSQLKDSIPVTELSASGPFESHDLLR-KGLPCVK-NELLPSHPLELSEKNFQLNQDKMNFSTLR |
MN.R.L.SQLKDS.P..ELS.SGPFESHD.L..KG.PC.K.NEL.P.H.LELSE.NFQLNQ.K.NFSTLR | |
Retrocopy | MNVRELRSQLKDSVPIIELSTSGPFESHDHLQ<KGFPCMK<NELSPNHLLELSENNFQLNQAKINFSTLR |
Parental | -NIQGLFAPLKLQMEFKAVQQVQRLPFLPSSNLSLDILRGNDETIGFEDILNDPSQSELMGEPHLMVEYK |
.N..GLFAPLK.QM.FK.V.QV..L.FLP.SNLSLDIL..ND.T.GFEDIL.D.SQ..LM.EP.LMV.YK | |
Retrocopy | <NTHGLFAPLKFQMKFKVV*QV*LL-FLPRSNLSLDILKSNDGTTGFEDIL-DLSQNKLMEEPYLMVKYK |
Parental | LGLL |
LG.L | |
Retrocopy | LGFL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |