RetrogeneDB ID: | retro_tsyr_1984 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_75059:466..710(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | POMP | ||
Ensembl ID: | ENSTSYG00000005121 | ||
Aliases: | None | ||
Description: | proteasome maturation protein [Source:HGNC Symbol;Acc:20330] |
Percent Identity: | 79.27 % |
Parental protein coverage: | 57.45 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | NQDKMNFSTLRNIQGLFAP-LKLQMEFKAVQQVQRLPFLSSSNLSLDILKGNDETIGFEDILNDPSQSEV |
N..KM.FSTLRNIQGL..P.LKL..EFKAVQ.VQRLPFLSSSNLSLDIL..NDETI.FEDILND.SQ.EV | |
Retrocopy | NSTKMKFSTLRNIQGLLTP>LKLHTEFKAVQKVQRLPFLSSSNLSLDILRANDETIEFEDILNDLSQGEV |
Parental | MGEPHMMVEYKL |
MG.PH.MV.YKL | |
Retrocopy | MGVPHLMVKYKL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |