RetrogeneDB ID: | retro_tbel_3437 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_140390:75842..76183(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | POMP | ||
Ensembl ID: | ENSTBEG00000012149 | ||
Aliases: | None | ||
Description: | proteasome maturation protein [Source:HGNC Symbol;Acc:20330] |
Percent Identity: | 67.24 % |
Parental protein coverage: | 73.55 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | NARGLGSQLKDSIPITELS-ASGPFESHDLLRKGFSCVKNELLPSHP-LELSEKNFQLNQDKMNFSTLRT |
NARGL.SQL..SIP.TELS..SGPFESH..L.K.FS.VKNEL.PSHP......K.FQLNQ.KM.FST.R. | |
Retrocopy | NARGLASQLRGSIPVTELS<TSGPFESHH-LQKCFSFVKNELFPSHPSSQIITKTFQLNQSKMTFSTRRS |
Parental | SQGLFAPLKLQMEFKAVQQVQRLPFLSSSNLSLDILRGNDETIGFE |
..GLF.PLKLQ....AV......PFLSSSNLSL.ILRGNDETIG.E | |
Retrocopy | IEGLFVPLKLQTGWRAVRWAPHRPFLSSSNLSLGILRGNDETIGSE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |