RetrogeneDB ID: | retro_mputfur_1632 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897460.1:19489..20002(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPLP0 | ||
Ensembl ID: | ENSMPUG00000003055 | ||
Aliases: | None | ||
Description: | ribosomal protein, large, P0 [Source:HGNC Symbol;Acc:10371] |
Percent Identity: | 70.22 % |
Parental protein coverage: | 55.21 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 3 |
Parental | DRATWKSNYFLKIIQLLDDYP-KCFIV-GADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENN |
DR.T.KSNYFLKIIQ...D.P.KCFIV.GADNVGSK..Q.I.MSL.G.AV.LM.K.TM..K.I.GHLENN | |
Retrocopy | DRVT*KSNYFLKIIQ--NDHP<KCFIV<GADNVGSKETQKICMSLHGRAVALMDKDTMIFKTI*GHLENN |
Parental | PALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIA-PCEVTVPAQNTGLGPEKTSFFQAL |
.ALE.L.P.I..NVGF.FTKEDLTEIR.ML..NKVPA.A.AGA...P.EVTV.A..TGLGPE...FFQA. | |
Retrocopy | *ALEELVPCIWVNVGFGFTKEDLTEIRNMLPTNKVPAVACAGALI<PSEVTVAAHHTGLGPE-*NFFQAF |
Parental | GITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLN |
.ITTKISRGT.EILS..QLIKTGD..GASEA..L.MLN | |
Retrocopy | DITTKISRGTTEILSEAQLIKTGDRLGASEAAQLSMLN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |