Parental gene: | RPLP0, ENSTSYG00000009732 |
| Aliases: | None |
| Description: | ribosomal protein, large, P0 [Source:HGNC Symbol;Acc:10371] |
| Organism: | Tarsier (Tarsius syrichta) |
| Coordinates: | scaffold_114651:1265..5345(-) |
>ENSTSYG00000009732
CAACTTTTGGATGACTACCCAAAATGCTTCATTGTGGGCGCAGACAACGTGGGCTCCAAGCAGATGCAGCAGATCCGCAT
GTCCCTCCGAGGGAAGGCTGTGGTGCTGATGGGCAAGAACACCATGATGCGCAAGGCCATCCGAGGGCATCTGGAAAACA
ACCCAGCTCTGGAGAAACTGTTGCCTCATATCCGGGGGAATGTAGGCTTTGTGTTCACCAAGGAGGACCTCACTGAGATC
CGGGACATGCTGCTGGCCAACAAGGTGCCAGCTGCTGCCCGTGCTGGTGCCATTGCCCCATGTGAAGTCACTGTACCAGC
CCAGAACACTGGTCTGGGGCCTGAGAAGACCTCCTTCTTCCAGGCTTTAGGTATCACCACTAAAATCTCCAGAGGCACCA
TTGAAATTCTGAGTGATGTGCAGTTGATTAAGACTGGAGACAAAGTGGGAGCCAGTGAAGCCACGCTGCTGAACATGCTG
AACATCTCCCCGTTCTCCTTTGGGCTGATCATCCAGCAGGTGTTCGATAATGGCAGCATCTACAACCCTGAAGTGCTTGA
CATCACAGAGGACACTCTGCACTCTCGCTTCCTGGAGGGTGTCCGCAATGTTGCCAGTGTTTGTCTGCAGATTGGTTATC
CCACTGTTGCATCAGTACCCCATTCTATTATCAATGGGTACAAACGAGTCCTGGCTTTGTCTGTGGAGACTGAATACACC
TTCCCACTTGCTGANNNNGTCAAGGCCTTCTTGGCTGATCCATCTGCCTTTGTGGCTGCTGCCCCTGTGGCTGCTGCTGC
CCCTGCTGCCCCTGCTGCCCTTGCAGCTCCAGCCAAGGTTGAAGCCAAGGAAGAGTCGGAGGAGTCGGATGAGGATATGG
GATTTGGTCTCTTTGACTAA
CAACTTTTGGATGACTACCCAAAATGCTTCATTGTGGGCGCAGACAACGTGGGCTCCAAGCAGATGCAGCAGATCCGCAT
GTCCCTCCGAGGGAAGGCTGTGGTGCTGATGGGCAAGAACACCATGATGCGCAAGGCCATCCGAGGGCATCTGGAAAACA
ACCCAGCTCTGGAGAAACTGTTGCCTCATATCCGGGGGAATGTAGGCTTTGTGTTCACCAAGGAGGACCTCACTGAGATC
CGGGACATGCTGCTGGCCAACAAGGTGCCAGCTGCTGCCCGTGCTGGTGCCATTGCCCCATGTGAAGTCACTGTACCAGC
CCAGAACACTGGTCTGGGGCCTGAGAAGACCTCCTTCTTCCAGGCTTTAGGTATCACCACTAAAATCTCCAGAGGCACCA
TTGAAATTCTGAGTGATGTGCAGTTGATTAAGACTGGAGACAAAGTGGGAGCCAGTGAAGCCACGCTGCTGAACATGCTG
AACATCTCCCCGTTCTCCTTTGGGCTGATCATCCAGCAGGTGTTCGATAATGGCAGCATCTACAACCCTGAAGTGCTTGA
CATCACAGAGGACACTCTGCACTCTCGCTTCCTGGAGGGTGTCCGCAATGTTGCCAGTGTTTGTCTGCAGATTGGTTATC
CCACTGTTGCATCAGTACCCCATTCTATTATCAATGGGTACAAACGAGTCCTGGCTTTGTCTGTGGAGACTGAATACACC
TTCCCACTTGCTGANNNNGTCAAGGCCTTCTTGGCTGATCCATCTGCCTTTGTGGCTGCTGCCCCTGTGGCTGCTGCTGC
CCCTGCTGCCCCTGCTGCCCTTGCAGCTCCAGCCAAGGTTGAAGCCAAGGAAGAGTCGGAGGAGTCGGATGAGGATATGG
GATTTGGTCTCTTTGACTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000005144 | ortholog_one2one | 4 retrogenes | |
| Canis familiaris | ENSCAFG00000010227 | ortholog_one2one | 5 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000002745 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000008677 | possible_ortholog | 3 retrogenes | |
| Felis catus | ENSFCAG00000013354 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000026582 | possible_ortholog | 5 retrogenes | |
| Myotis lucifugus | ENSMLUG00000001970 | ortholog_one2one | 11 retrogenes | |
| Macaca mulatta | ENSMMUG00000009157 | possible_ortholog | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000003055 | ortholog_one2one | 4 retrogenes | |
| Mus musculus | ENSMUSG00000067274 | possible_ortholog | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000000292 | ortholog_one2one | 11 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000005749 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000003843 | possible_ortholog | 4 retrogenes | |
| Petromyzon marinus | ENSPMAG00000001339 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000005022 | possible_ortholog | 5 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000003110 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000001148 | possible_ortholog | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000001623 | possible_ortholog | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000011327 | ortholog_one2one | 4 retrogenes | |
| Vicugna pacos | ENSVPAG00000012156 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tsyr_75 | 86.46 | 64.21 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tsyr_84 | 87.65 | 56.86 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_tsyr_130 | 87.42 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_tsyr_727 | 80.40 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_tsyr_1133 | 67.95 | 51.84 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_tsyr_1376 | 89.71 | 58.19 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_tsyr_1429 | 60.00 | 54.52 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTSYG00000009732 retrocopies