Parental gene: | RPLP0, ENSNLEG00000000292 |
| Aliases: | None |
| Description: | ribosomal protein, large, P0 [Source:HGNC Symbol;Acc:10371] |
| Organism: | Gibbon (Nomascus leucogenys) |
| Coordinates: | GL397477.1:1632898..1639740(-) |
>ENSNLEG00000000292
ATGGCCTTTGAGCAACTATTGGATGATTATCCGAAATGTTTCATCGTGGGAGCAGACAATGTGGGCTCCAAGCAGATGCA
GCAGATCCGCATGTCCCTTCGCGGGAAGGCCGTGGTGCTGATGGGCAAGAACACCATGATGCGCAAGGCCATCCGAGGGC
ACCTGGAAAACAACCCAGCTCTGGAGAAACTGCTGCCTCATATCCGGGGGAATGTGGGCTTTGTGTTCACCAAGGAGGAC
CTCACTGAGATCAGGGACATGTTGCTGGCCAATAAGGTGCCAGCTGCTGCCCGTGCTGGTGCCATTGCCCCATGTGAAGT
CACTGTGCCAGCCCAGAACACTGGTCTCGGGCCCGAGAAGACTTCCTTTTTCCAGGCTTTAGGTATCACCACTAAAATCT
CCAGGGGCACCATTGAAATCCTGAGTGATGTGCAGCTGATCAAGACTGGAGACAAAGTGGGAGCCAGCGAAGCCACGCTG
CTGAACATGCTCAACATCTCCCCCTTCTCCTTTGGGCTGGTCATCCAGCAGGTGTTCGACAATGGCAGCATCTACAACCC
TGAAGTGCTTGACATCACAGAGGAAACTCTGCATTCTCGCTTCTTGGAGGGTGTCCGCAATGTTGCCAGTGTCTGTCTGC
AGATTGGCTACCCAACTGTTGCATCAGTGCCCCATTCTATCATCAACGGGTACAAACGAGTCCTGGCCTTGTCTGTGGAG
ACGGATTACACCTTCCCACTTGCTGAAAAGGTCAAGGCCTTCTTGGCTGATCCATCTGCCTTTGTGGCTGCTGCCCCTGT
GGCTGCTGCCACCACAGCTGCTCCTGCTGCTGCTGCAGCCCCAGCTAAGGTTGAAGCCAAGGAAGAGTCGGAGGAGTCGG
ACGAGGATATGGGATTTGGTCTCTTTGACTAA
ATGGCCTTTGAGCAACTATTGGATGATTATCCGAAATGTTTCATCGTGGGAGCAGACAATGTGGGCTCCAAGCAGATGCA
GCAGATCCGCATGTCCCTTCGCGGGAAGGCCGTGGTGCTGATGGGCAAGAACACCATGATGCGCAAGGCCATCCGAGGGC
ACCTGGAAAACAACCCAGCTCTGGAGAAACTGCTGCCTCATATCCGGGGGAATGTGGGCTTTGTGTTCACCAAGGAGGAC
CTCACTGAGATCAGGGACATGTTGCTGGCCAATAAGGTGCCAGCTGCTGCCCGTGCTGGTGCCATTGCCCCATGTGAAGT
CACTGTGCCAGCCCAGAACACTGGTCTCGGGCCCGAGAAGACTTCCTTTTTCCAGGCTTTAGGTATCACCACTAAAATCT
CCAGGGGCACCATTGAAATCCTGAGTGATGTGCAGCTGATCAAGACTGGAGACAAAGTGGGAGCCAGCGAAGCCACGCTG
CTGAACATGCTCAACATCTCCCCCTTCTCCTTTGGGCTGGTCATCCAGCAGGTGTTCGACAATGGCAGCATCTACAACCC
TGAAGTGCTTGACATCACAGAGGAAACTCTGCATTCTCGCTTCTTGGAGGGTGTCCGCAATGTTGCCAGTGTCTGTCTGC
AGATTGGCTACCCAACTGTTGCATCAGTGCCCCATTCTATCATCAACGGGTACAAACGAGTCCTGGCCTTGTCTGTGGAG
ACGGATTACACCTTCCCACTTGCTGAAAAGGTCAAGGCCTTCTTGGCTGATCCATCTGCCTTTGTGGCTGCTGCCCCTGT
GGCTGCTGCCACCACAGCTGCTCCTGCTGCTGCTGCAGCCCCAGCTAAGGTTGAAGCCAAGGAAGAGTCGGAGGAGTCGG
ACGAGGATATGGGATTTGGTCTCTTTGACTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000005144 | ortholog_one2one | 4 retrogenes | |
| Canis familiaris | ENSCAFG00000010227 | ortholog_one2one | 5 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000002745 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000008677 | possible_ortholog | 3 retrogenes | |
| Felis catus | ENSFCAG00000013354 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000026582 | possible_ortholog | 5 retrogenes | |
| Myotis lucifugus | ENSMLUG00000001970 | ortholog_one2one | 11 retrogenes | |
| Macaca mulatta | ENSMMUG00000009157 | possible_ortholog | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000003055 | ortholog_one2one | 4 retrogenes | |
| Mus musculus | ENSMUSG00000067274 | possible_ortholog | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000005749 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000003843 | possible_ortholog | 4 retrogenes | |
| Petromyzon marinus | ENSPMAG00000001339 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000005022 | possible_ortholog | 5 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000003110 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000001148 | possible_ortholog | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000001623 | possible_ortholog | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000011327 | ortholog_one2one | 4 retrogenes | |
| Tarsius syrichta | ENSTSYG00000009732 | ortholog_one2one | 7 retrogenes | |
| Vicugna pacos | ENSVPAG00000012156 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_nleu_1080 | 94.87 | 64.36 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_nleu_1365 | 86.38 | 98.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_nleu_1419 | 78.37 | 68.32 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_nleu_1470 | 81.18 | 61.06 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_nleu_1551 | 85.13 | 64.36 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_nleu_1639 | 89.30 | 98.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_nleu_1686 | 67.58 | 70.63 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_nleu_1722 | 83.33 | 62.38 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_nleu_2058 | 94.00 | 98.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_nleu_2927 | 89.63 | 98.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_nleu_3095 | 89.23 | 64.36 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSNLEG00000000292 retrocopies