RetrogeneDB ID: | retro_nleu_1551 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397299.1:2728084..2728660(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPLP0 | ||
Ensembl ID: | ENSNLEG00000000292 | ||
Aliases: | None | ||
Description: | ribosomal protein, large, P0 [Source:HGNC Symbol;Acc:10371] |
Percent Identity: | 85.13 % |
Parental protein coverage: | 64.36 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGF |
QLLD.YPKCFIVGADN.GSKQM.QI.MSL..KA.VL.GKNTMM.KAI.GHLENN.ALEKLLPHI.GNVGF | |
Retrocopy | QLLDNYPKCFIVGADNMGSKQMHQIHMSLCRKAMVLIGKNTMMHKAI*GHLENNAALEKLLPHIQGNVGF |
Parental | VFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDV |
VF..EDLTEIRD.LLANKVPAAA.AG.IAPCEVTVP.QNTGLGPEKTSF.Q.LGITTKISRG..EILSDV | |
Retrocopy | VFIREDLTEIRDLLLANKVPAAAHAGSIAPCEVTVPVQNTGLGPEKTSFLQVLGITTKISRGATEILSDV |
Parental | QLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHS |
QLIKTGDKVGASE.TLLN...ISPFSFGLVIQQVFDNGSI.NPEVLDITEET..S | |
Retrocopy | QLIKTGDKVGASETTLLN---ISPFSFGLVIQQVFDNGSINNPEVLDITEETAFS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |