RetrogeneDB ID: | retro_mmur_1268 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | scaffold_3789:66722..67360(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS4X | ||
Ensembl ID: | ENSMICG00000016606 | ||
Aliases: | None | ||
Description: | ribosomal protein S4, X-linked [Source:HGNC Symbol;Acc:10424] |
Percent Identity: | 96.26 % |
Parental protein coverage: | 80.99 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGP-HKLRECLPLIIFLRNRLKYALTGDEVKKICMQRF |
MA.GPKKHLKRVAAPKHWMLDKLT.VFAPRPSTGP.HKLRECLPLIIFLRNRLKYALTGDEVKKICMQ.F | |
Retrocopy | MAHGPKKHLKRVAAPKHWMLDKLTSVFAPRPSTGP<HKLRECLPLIIFLRNRLKYALTGDEVKKICMQCF |
Parental | IKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHL |
IKID.KV.TDITYPAGFMDVISIDKTGENFRLIYDTKGRFA.HRITPEEAKYKLCKVRKIFVGTKGIPHL | |
Retrocopy | IKIDDKVQTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAGHRITPEEAKYKLCKVRKIFVGTKGIPHL |
Parental | VTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVH |
VTHDARTIRYPDPLIKVNDTIQ.DLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVH | |
Retrocopy | VTHDARTIRYPDPLIKVNDTIQMDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVH |
Parental | VKDA |
VKDA | |
Retrocopy | VKDA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |