RetrogeneDB ID: | retro_nleu_2613 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397381.1:1034868..1035434(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS4XP21 | ||
Ensembl ID: | ENSNLEG00000018121 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 81.15 % |
Parental protein coverage: | 72.24 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | IKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHL |
.KIDGKVRTDITYPAGFMDVI..DK.GENF.L..DTKG.FAV.R..PEEAKY.LCK.RKIFVGTKG..HL | |
Retrocopy | VKIDGKVRTDITYPAGFMDVINTDKMGENFHLTWDTKGHFAVQRTIPEEAKYMLCKLRKIFVGTKGMCHL |
Parental | VTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTG-NLCMVTGGANLGRIGVITNRERHPGSFDVV |
VT.DA..I.YPDPLIKVNDTIQIDLETGKITDFIK.DTG.NLC.V.G.ANLGRIG.I.NR.RHP.SF.VV | |
Retrocopy | VTLDAHAICYPDPLIKVNDTIQIDLETGKITDFIKIDTG<NLCVVSGSANLGRIGMI-NRKRHPRSFNVV |
Parental | HVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAK |
HVKDANGNSFATR.SNIFVIGKGN.PWISLP.GKGI.LTIAEE.DKRL.A. | |
Retrocopy | HVKDANGNSFATRFSNIFVIGKGNRPWISLP*GKGICLTIAEETDKRLVAR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |