RetrogeneDB ID: | retro_mmur_1600 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | scaffold_90340:1310..1949(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS4X | ||
Ensembl ID: | ENSMICG00000016606 | ||
Aliases: | None | ||
Description: | ribosomal protein S4, X-linked [Source:HGNC Symbol;Acc:10424] |
Percent Identity: | 97.18 % |
Parental protein coverage: | 80.99 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | RLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK |
RLKYALTGDEVKKICMQ.FIKIDGKVRTDITYPAGFMDVISIDKTGENFRL.YDTKGRFAVH.ITPEEAK | |
Retrocopy | RLKYALTGDEVKKICMQCFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLFYDTKGRFAVH*ITPEEAK |
Parental | YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLG |
YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLET.KITDFIKFDT.NLCMVTGGANLG | |
Retrocopy | YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETSKITDFIKFDTSNLCMVTGGANLG |
Parental | RIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQ |
RIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAK. | |
Retrocopy | RIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAK* |
Parental | SSG |
SSG | |
Retrocopy | SSG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |