RetrogeneDB ID: | retro_nleu_2776 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397425.1:1812730..1813245(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS4XP21 | ||
Ensembl ID: | ENSNLEG00000018121 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 91.33 % |
Parental protein coverage: | 65.02 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKI-CMQRF |
MARGPKKHLK.VAAPKHWMLDKLTGVFAPRPST.P.KLRECLPLIIFLRNRLKYALTGD.VKKI..MQ.F | |
Retrocopy | MARGPKKHLKQVAAPKHWMLDKLTGVFAPRPSTSPCKLRECLPLIIFLRNRLKYALTGDKVKKI>SMQWF |
Parental | IKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVR-KIFVGTKGIPH |
IKIDGKVRTDITYPAGFMDVISIDK.GENF.LI.DTKG.FAVHRITPEEAKYKL.KVR.KIFVGTKGIP. | |
Retrocopy | IKIDGKVRTDITYPAGFMDVISIDKMGENFCLICDTKGCFAVHRITPEEAKYKL*KVR>KIFVGTKGIPY |
Parental | LVTHDARTIRYPDPLIKVNDTIQIDLETGKITD |
LVTHDARTI.YPDPLIKVNDTIQIDLETGKITD | |
Retrocopy | LVTHDARTICYPDPLIKVNDTIQIDLETGKITD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |