RetrogeneDB ID: | retro_nleu_2587 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397376.1:1949652..1950412(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS4XP21 | ||
Ensembl ID: | ENSNLEG00000018121 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 86.27 % |
Parental protein coverage: | 96.58 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MARGPKKHLKR-VAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRF |
MA.G.KKHL....A.PKHWML.KLT.VFAP..ST..HKLRECLP.IIFLR.RLKYALTGDEV.KICMQRF | |
Retrocopy | MAHGRKKHLNH>TATPKHWMLHKLTSVFAPCLSTSVHKLRECLPFIIFLRSRLKYALTGDEV-KICMQRF |
Parental | IKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHL |
IKIDGKVRTDITYPAGFMDVISI.K.G.NF.LIYDTKG.FAVH.IT.EEAKYK.CKVRKIF..TKGIPHL | |
Retrocopy | IKIDGKVRTDITYPAGFMDVISIGKAGGNFCLIYDTKGCFAVHHITHEEAKYKWCKVRKIFADTKGIPHL |
Parental | VTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVH |
.THDARTI.YPDPLIKVND.IQIDLETGKITDFIKFDTGNLCMVTGGAN.GRIGVITNRERHPGSFDVVH | |
Retrocopy | GTHDARTICYPDPLIKVNDSIQIDLETGKITDFIKFDTGNLCMVTGGANPGRIGVITNRERHPGSFDVVH |
Parental | VKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDK |
VKDA.GNSFATRL.NIFVIGKGNKPWISLP.GKGIRLTIAEER.. | |
Retrocopy | VKDASGNSFATRLFNIFVIGKGNKPWISLP*GKGIRLTIAEERQE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |