RetrogeneDB ID: | retro_mmur_1416 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | scaffold_55976:3876..4595(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS4X | ||
Ensembl ID: | ENSMICG00000016606 | ||
Aliases: | None | ||
Description: | ribosomal protein S4, X-linked [Source:HGNC Symbol;Acc:10424] |
Percent Identity: | 94.67 % |
Parental protein coverage: | 92.4 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | DKLTGVFAPRPSTGPHKLRECL-PLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDV |
DKLTGVFAPR.......LRECL.PLIIFLRN.L...LTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDV | |
Retrocopy | DKLTGVFAPRHHVP--QLRECL<PLIIFLRNSL-VCLTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDV |
Parental | ISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDT |
ISIDKTGENFRLIYDTKGRF.VHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDT | |
Retrocopy | ISIDKTGENFRLIYDTKGRFSVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDT |
Parental | IQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIG |
IQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIG | |
Retrocopy | IQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIG |
Parental | KGNKPWISLPRGKGIRLTIAEERDKRLAAKQSSG |
KGNKPWISLPRGKGIRLTIAEERDKRLAAKQSSG | |
Retrocopy | KGNKPWISLPRGKGIRLTIAEERDKRLAAKQSSG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |