RetrogeneDB ID: | retro_mmur_293 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | GeneScaffold_2241:86659..87387(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS4X | ||
Ensembl ID: | ENSMICG00000016606 | ||
Aliases: | None | ||
Description: | ribosomal protein S4, X-linked [Source:HGNC Symbol;Acc:10424] |
Percent Identity: | 95.92 % |
Parental protein coverage: | 92.78 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKI |
RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPL.IFLRNRLKYAL.GDEVK.ICMQRF.KI | |
Retrocopy | RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLSIFLRNRLKYALIGDEVK-ICMQRFVKI |
Parental | DGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTH |
DGKV.TDITYPAG.MDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTH | |
Retrocopy | DGKV*TDITYPAGCMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTH |
Parental | DARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHP-GSFDVVHVK |
DARTIRYPDPLIKVNDTIQ.DLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHP.GSFDVVHVK | |
Retrocopy | DARTIRYPDPLIKVNDTIQMDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHP<GSFDVVHVK |
Parental | DANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRL |
.ANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR. | |
Retrocopy | GANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |